Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31204
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical pr...   123   1e-28
U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...    35   0.043
AC084197-25|AAK68591.1|  609|Caenorhabditis elegans Hypothetical...    31   0.92 
U58757-5|AAC47919.3|  555|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AF040645-4|AAB94974.1|  306|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z81116-7|CAB03306.1|  669|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical
           protein K04D7.3 protein.
          Length = 483

 Score =  123 bits (296), Expect = 1e-28
 Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   VRAYSVLQH-EPDKPNIQTAIPGPKSQQLLKELNTLQQAGAVQLFADYDKSIGNYFFDAD 177
           VR  S + + EP  P+I T+IPGPKS+ L +E++ + Q  +V+   DY+KS GNY  DAD
Sbjct: 14  VRGVSAIANAEPSGPSISTSIPGPKSKALKQEMDKVHQTTSVRFHVDYEKSFGNYVVDAD 73

Query: 178 GNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKSLINRPALGVFP 315
           GNA LD +TQISSLP+GYNHP+L+      H + SL++RPALG FP
Sbjct: 74  GNALLDVYTQISSLPLGYNHPDLVKVASQPHLITSLVSRPALGSFP 119



 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 37/85 (43%), Positives = 53/85 (62%)
 Frame = +2

Query: 311 FLQPDWPEKLKNVLLSVGPVGLDNIATMMCGSCSIENAYKTVFIWYQTRERGGKLDFTPE 490
           F + D+ + + + L S+ P GL  + TM+CG+ + ENA KT FIWYQ + RGG L     
Sbjct: 118 FPRTDFADGISHALTSIAPKGLKAVQTMLCGTSANENAIKTAFIWYQAQRRGG-LGPDAL 176

Query: 491 EIDSCMLNQVPGSPKLSILSF*GKF 565
            ++SCM  Q PG+P LS++ F G F
Sbjct: 177 HLESCMNQQKPGTPNLSVMGFEGAF 201



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = +3

Query: 534 NCQYYHFEGSFHGRTFGALSTTRSKPLHKLDCPAFDW 644
           N     FEG+FHGR+   LS TRSKP+HK+D PAFDW
Sbjct: 191 NLSVMGFEGAFHGRSLCMLSVTRSKPIHKVDIPAFDW 227


>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = +1

Query: 79  QLLKELNTLQQAGAVQLFADY---DKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELL 249
           Q ++ L  L   G V  + D     K    + FD++G  +LD F  I ++ VG+ HP++ 
Sbjct: 2   QRVQALRPLLPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKIN 61

Query: 250 SAFEDQ 267
           +A  +Q
Sbjct: 62  AALTEQ 67


>AC084197-25|AAK68591.1|  609|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.19 protein.
          Length = 609

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 139 YDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 267
           YD+  G YFFD D + F    T   +  + Y   E L A++++
Sbjct: 81  YDEDTGEYFFDRDPDIFRHILTFYRTGKLHYPRHECLVAYDEE 123


>U58757-5|AAC47919.3|  555|Caenorhabditis elegans Hypothetical
           protein C01B10.9 protein.
          Length = 555

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 118 AVQLFADYDKSIGNYFFDADGNAFLDAF 201
           A  LF +    +GNYFFDAD     D F
Sbjct: 76  ATGLFEEEHGIVGNYFFDADTKKAFDYF 103


>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
           protein C18H2.1 protein.
          Length = 1770

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 175 DGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKSLI 288
           D  A    FTQ+ ++P   +  E + A E  +NLKSL+
Sbjct: 459 DTAALQSLFTQLKAMPSQSDDSESIKAIEKLNNLKSLL 496


>AF040645-4|AAB94974.1|  306|Caenorhabditis elegans Hypothetical
           protein F52C6.8 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 160 NFQYFCHNQQKAELLPLAVEC*VLSAAAATWARESLFEY 44
           N Q++     K E + + + C +L  A ATW  ++ FE+
Sbjct: 35  NVQWYMAVSHKKEDMAVYLHCNILGKAEATWCIDAEFEF 73


>Z81116-7|CAB03306.1|  669|Caenorhabditis elegans Hypothetical
           protein T06C12.8 protein.
          Length = 669

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +1

Query: 139 YDKSIGNY-FFDADGNAFLDAFTQISSL 219
           Y+ S G Y FFD +G ++L  F+Q++ L
Sbjct: 573 YNISTGTYRFFDTNGFSYLSVFSQLTPL 600


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,669,434
Number of Sequences: 27780
Number of extensions: 342283
Number of successful extensions: 846
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)