Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31199
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 377 e-105
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 377 e-105
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 377 e-105
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 48 9e-06
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 46 2e-05
U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fus... 29 3.2
EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell f... 29 3.2
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 29 4.3
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 29 4.3
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 27 9.8
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 377 bits (928), Expect = e-105
Identities = 181/216 (83%), Positives = 201/216 (93%)
Frame = +2
Query: 2 AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 181
AYPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL
Sbjct: 294 AYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 353
Query: 182 ETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 361
ETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA
Sbjct: 354 ETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 413
Query: 362 ATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHI 541
+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF H+
Sbjct: 414 STQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHL 473
Query: 542 KTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 649
++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 474 RSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 509
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 377 bits (928), Expect = e-105
Identities = 181/216 (83%), Positives = 201/216 (93%)
Frame = +2
Query: 2 AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 181
AYPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL
Sbjct: 286 AYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 345
Query: 182 ETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 361
ETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA
Sbjct: 346 ETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 405
Query: 362 ATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHI 541
+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF H+
Sbjct: 406 STQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHL 465
Query: 542 KTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 649
++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 466 RSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 501
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 377 bits (928), Expect = e-105
Identities = 181/216 (83%), Positives = 201/216 (93%)
Frame = +2
Query: 2 AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 181
AYPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL
Sbjct: 321 AYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 380
Query: 182 ETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 361
ETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA
Sbjct: 381 ETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 440
Query: 362 ATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHI 541
+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF H+
Sbjct: 441 STQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHL 500
Query: 542 KTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 649
++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 501 RSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 536
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/90 (31%), Positives = 52/90 (57%)
Frame = +2
Query: 5 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 184
+PG ++ + + ERA ++ + GS+T +P++ D++ IP IT+GQI+++
Sbjct: 303 FPGYMYTDLATIYERAGRVEGR--DGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVD 360
Query: 185 TELFYKGIRPAINVGLSVSRVGSAAQTKAM 274
+L + I P INV S+SR+ +A + M
Sbjct: 361 RQLHNRLIYPPINVLPSLSRLMKSAIGEGM 390
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 52/90 (57%)
Frame = +2
Query: 5 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 184
+PG ++ + + ERA ++ + G S+T +P++ D++ IP IT+GQI+++
Sbjct: 315 FPGYMYTDLATIYERAGRVKGREG--SITQIPILTMPNNDITHPIPDLTGYITEGQIYID 372
Query: 185 TELFYKGIRPAINVGLSVSRVGSAAQTKAM 274
+L + I P I+V S+SR+ +A + M
Sbjct: 373 KQLHKRLIYPPIDVLPSLSRLMKSAVGEGM 402
>U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fusion
failure protein1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 336 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 440
P +W HS CS EC L S D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell
fusion failure-1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 336 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 440
P +W HS CS EC L S D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 430 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 311
G L L+EE K S V + LC + R+ + K +L L
Sbjct: 649 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 688
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 430 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 311
G L L+EE K S V + LC + R+ + K +L L
Sbjct: 648 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 687
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 27.5 bits (58), Expect = 9.8
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 16/141 (11%)
Frame = +2
Query: 221 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGS-------DLDAATQQLL 379
N L S ++A A+ G+M L + + F+ FG+ +L A ++L
Sbjct: 126 NRTLQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLT 185
Query: 380 NRGMRLTELLKQGQ-----YVPMAIEEQV--AIIYCGVR--GHLDKLDPSKITAFEKEFT 532
R LT L Q YV EE V A+ Y G + H+ ++D K+ + +KEF
Sbjct: 186 KRVTHLTGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVD--KVGSKKKEFG 243
Query: 533 QHIKTSHQGLLSTIAKDGQIT 595
+ + L I +D IT
Sbjct: 244 KDMAIFVGNLPFEITEDALIT 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,789,156
Number of Sequences: 27780
Number of extensions: 328716
Number of successful extensions: 1096
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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