Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31196
         (670 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0283 + 1903869-1904786                                           31   0.83 
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608...    31   1.1  
06_03_1251 + 28749558-28749818,28749953-28750146,28750269-28750695     29   4.4  
02_02_0707 + 13144147-13144788,13145115-13148663                       29   4.4  
02_01_0330 + 2325504-2325739,2326749-2327622                           29   4.4  
01_06_1673 + 39059483-39059611,39059851-39060032,39060247-390604...    29   4.4  
06_03_1253 + 28761311-28761598,28761689-28761882,28762327-28762711     28   7.7  
05_04_0323 + 20248868-20248988,20249503-20249603                       28   7.7  

>02_01_0283 + 1903869-1904786
          Length = 305

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 21/81 (25%), Positives = 36/81 (44%)
 Frame = -1

Query: 610 VCVHVGAAVGARSHFFQSLEHSWGPSQVGLVESGMAVSTTTQPIKSSGVVIRNYSHSFEG 431
           +C+  G++ G  S F    +  W  +++         S +  P  + G +I N   S + 
Sbjct: 118 LCLACGSSDGNISVFTARSDGGWDTTRIDQAHPVGVTSVSWAPAMAPGALI-NTGPSGQF 176

Query: 430 ERLQSTDVSDGCDDPIVVWLL 368
           E +Q    S GCD+ + VW L
Sbjct: 177 EYVQKL-ASGGCDNTVKVWKL 196


>02_02_0011 +
           6083431-6085541,6086659-6086779,6087188-6087247,
           6087354-6088391,6089733-6089925,6090326-6090375,
           6090470-6090744,6091114-6091180,6091189-6091278,
           6091301-6091381,6091435-6091593
          Length = 1414

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/79 (25%), Positives = 31/79 (39%)
 Frame = -1

Query: 610 VCVHVGAAVGARSHFFQSLEHSWGPSQVGLVESGMAVSTTTQPIKSSGVVIRNYSHSFEG 431
           +C   G+    R H  Q+++      +VGL E    +     P  S G  +   S     
Sbjct: 748 LCWKEGSHESGRQHLLQTIDSYISDERVGLAEPADGIELYLCP--SQGKTVEILSRHLPK 805

Query: 430 ERLQSTDVSDGCDDPIVVW 374
           E L+S  VS      ++VW
Sbjct: 806 EHLESLAVSASSIIGVIVW 824


>06_03_1251 + 28749558-28749818,28749953-28750146,28750269-28750695
          Length = 293

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -1

Query: 589 AVGARSHFFQSLEHSWGPSQVGLVESGMAVSTTTQPIKSSG 467
           A+    +FFQ  E SWG  +  +V+ G  +  T      SG
Sbjct: 16  AIAHGGNFFQDAEVSWGQGRGKIVDGGRGLDLTLDRSSGSG 56


>02_02_0707 + 13144147-13144788,13145115-13148663
          Length = 1396

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
 Frame = -2

Query: 606  VSTSGQRS-VRAATSS--KVLSTLGDHLRSDWSNPGWQYLPPRNPSSPPVWLFGTTATAS 436
            V+T G+ +  R AT +   + +T GDH+RS W N     L     S  P  L G TA   
Sbjct: 809  VTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTAD-D 867

Query: 435  KENVSNLLTS 406
            +E+ S++L S
Sbjct: 868  QESSSDMLPS 877


>02_01_0330 + 2325504-2325739,2326749-2327622
          Length = 369

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 8/13 (61%), Positives = 13/13 (100%)
 Frame = +3

Query: 561 WKKWLRAPTAAPT 599
           W++WLR+P+A+PT
Sbjct: 65  WRRWLRSPSASPT 77


>01_06_1673 +
           39059483-39059611,39059851-39060032,39060247-39060445,
           39060532-39060693,39060920-39061222,39061343-39061603
          Length = 411

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 610 VCVHVGAA-VGARSHFFQSLEHSWGPSQVGLVESGMAVSTTT 488
           VC+   AA     +H+F++++H+       +++ GMA +  T
Sbjct: 184 VCIGTSAAPTFLPAHYFETVDHTGASQSFNIIDGGMAANNPT 225


>06_03_1253 + 28761311-28761598,28761689-28761882,28762327-28762711
          Length = 288

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/53 (24%), Positives = 27/53 (50%)
 Frame = -1

Query: 610 VCVHVGAAVGARSHFFQSLEHSWGPSQVGLVESGMAVSTTTQPIKSSGVVIRN 452
           VC  +  A GA  +F+Q ++ +WG  +  ++ +G  ++ +      SG   +N
Sbjct: 18  VCSVLLLAGGAAGNFYQDVDITWGDGRGKILGNGQLLTLSLDRSSGSGFQSKN 70


>05_04_0323 + 20248868-20248988,20249503-20249603
          Length = 73

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 303 LKAQSILVSTLLHVAWLPSLSKLWHSDDE 217
           + A +I V+T+LH+ W P   KL     E
Sbjct: 1   MAAAAIAVATILHLGWFPCTGKLRRGQPE 29


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,740,358
Number of Sequences: 37544
Number of extensions: 444409
Number of successful extensions: 1460
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)