Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31190
         (367 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80837-5|AAB37901.1|  455|Caenorhabditis elegans Hypothetical pr...    33   0.083
Z81575-10|CAB04640.1|  338|Caenorhabditis elegans Hypothetical p...    27   5.4  
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr...    26   7.2  
U97406-1|AAC24294.1|  141|Caenorhabditis elegans Hypothetical pr...    26   7.2  
AC084158-9|AAK68559.2|  465|Caenorhabditis elegans Hypothetical ...    26   7.2  
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical ...    26   9.5  

>U80837-5|AAB37901.1|  455|Caenorhabditis elegans Hypothetical
           protein F07E5.1 protein.
          Length = 455

 Score = 32.7 bits (71), Expect = 0.083
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 14  PTSAGWLNSMLVFHHISPLPPLLHYHLISHNFNHLRL 124
           P     +NS L+F H+ PLP  L    + H  N LRL
Sbjct: 308 PFPVDTVNSQLIFQHLHPLPEDLDDSSVQHLINRLRL 344


>Z81575-10|CAB04640.1|  338|Caenorhabditis elegans Hypothetical
           protein R08H2.13 protein.
          Length = 338

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 9/16 (56%), Positives = 15/16 (93%)
 Frame = +1

Query: 172 IHFCIAISFSFVIILL 219
           I FC++ISF+F+++LL
Sbjct: 16  IGFCLSISFNFILLLL 31


>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
           protein B0240.3 protein.
          Length = 1093

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 9/35 (25%), Positives = 23/35 (65%)
 Frame = +3

Query: 213 PFKKTVYILFINSDKARQQSLSNIKRKLLDKQRIK 317
           PF+   +I   N++ ++  S+ +++R + +KQR++
Sbjct: 387 PFQDVRFIDLTNTEGSQHMSIQSLQRNMEEKQRLQ 421


>U97406-1|AAC24294.1|  141|Caenorhabditis elegans Hypothetical
          protein F40E3.3 protein.
          Length = 141

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 20 SAGWLNSMLVFHHISPLPPLLHYHLI 97
          S  + + +L+FHHI  L  LLH  L+
Sbjct: 9  SGFFTSKILIFHHIRHLHQLLHLELL 34


>AC084158-9|AAK68559.2|  465|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.15 protein.
          Length = 465

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 29  WLNSMLVFHHISPLPPLLHYHLISHNFN-HLRLFNCH 136
           W+    +   ISPLP  ++Y+ +SH+ + +  LF C+
Sbjct: 91  WMAICSLLMAISPLPFTIYYYNLSHHLDFNQTLFLCY 127


>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
           protein T20F7.5 protein.
          Length = 1065

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 243 INSDKARQQSLSNIKRKLLDK 305
           + S  A Q+ L N+K+KLL+K
Sbjct: 830 VASSSAEQEELKNLKKKLLNK 850


>AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical
           protein Y32H12A.5 protein.
          Length = 581

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 29  WLNSMLVFHHISPLPPLLHYHLISHNFNH 115
           W  S  +FH    L   +HYH IS    H
Sbjct: 507 WFQSHQLFHTFVVLAAFVHYHAISQMGMH 535


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,989,469
Number of Sequences: 27780
Number of extensions: 110613
Number of successful extensions: 338
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)