Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31190
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   4.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   4.6  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    21   6.0  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      21   6.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   8.0  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    20   8.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   8.0  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 205 VIILLKRQFTFYLL 246
           V +L KR+F++YL+
Sbjct: 233 VDLLFKREFSYYLI 246


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 205 VIILLKRQFTFYLL 246
           V +L KR+F++YL+
Sbjct: 233 VDLLFKREFSYYLI 246


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 175 HFCIAISFSFVIILL 219
           H    + FSFV+ILL
Sbjct: 10  HLITVLLFSFVVILL 24


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 175 HFCIAISFSFVIILL 219
           H    + FSFV+ILL
Sbjct: 10  HLITVLLFSFVVILL 24


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 202 FVIILLKRQFTFYLLIAIKLVNSPSVT 282
           F ++ +      Y+LIAIKL  S  +T
Sbjct: 229 FFVLPMTIIIVLYILIAIKLRRSRMLT 255


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 255 KARQQSLSNIKRKLLDKQRIKLCLAV 332
           K +Q S+  I R      R+K C+AV
Sbjct: 57  KNQQCSILRINRNRCQYCRLKKCIAV 82


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 255 KARQQSLSNIKRKLLDKQRIKLCLAV 332
           K +Q S+  I R      R+K C+AV
Sbjct: 106 KNQQCSILRINRNRCQYCRLKKCIAV 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,211
Number of Sequences: 438
Number of extensions: 1227
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)