Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31189
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical pr... 38 0.004
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 31 0.55
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 30 0.95
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 2.9
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 29 2.9
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 29 2.9
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 2.9
Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical pr... 27 6.7
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 27 6.7
AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein. 27 6.7
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical pr... 27 8.9
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 27 8.9
U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin st... 27 8.9
U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 27 8.9
>Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/53 (32%), Positives = 33/53 (62%)
Frame = +2
Query: 332 ELKDVIRREIRKELKIKEGAEKLREVPTDRRSLSDVANIVKKANIKLNELKSD 490
EL+ VIR+++ K+LKIK G +++ + +DRR + + N ++ +L+ D
Sbjct: 74 ELRSVIRKDLTKKLKIKSGYSRIKLITSDRRQSEFLRYELSDLNEQIADLQED 126
Score = 30.7 bits (66), Expect = 0.72
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 293 ECIPEIALPSKLEELKDVIRREIRKELKIKEGAEK-LREVPTDRRSLSDVANIVKKANIK 469
+C E PSKL +++ E+ KELK+K G E+ LR P + D +++ + K
Sbjct: 150 DCDVENGPPSKLV----ILQLELEKELKVKRGLEQFLRGAPDKSKVHGDSQSLLDDSRAK 205
Query: 470 LNELK 484
+ L+
Sbjct: 206 IAMLR 210
>Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/53 (32%), Positives = 33/53 (62%)
Frame = +2
Query: 332 ELKDVIRREIRKELKIKEGAEKLREVPTDRRSLSDVANIVKKANIKLNELKSD 490
EL+ VIR+++ K+LKIK G +++ + +DRR + + N ++ +L+ D
Sbjct: 74 ELRSVIRKDLTKKLKIKSGYSRIKLITSDRRQSEFLRYELSDLNEQIADLQED 126
Score = 30.7 bits (66), Expect = 0.72
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 293 ECIPEIALPSKLEELKDVIRREIRKELKIKEGAEK-LREVPTDRRSLSDVANIVKKANIK 469
+C E PSKL +++ E+ KELK+K G E+ LR P + D +++ + K
Sbjct: 150 DCDVENGPPSKLV----ILQLELEKELKVKRGLEQFLRGAPDKSKVHGDSQSLLDDSRAK 205
Query: 470 LNELK 484
+ L+
Sbjct: 206 IAMLR 210
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 31.1 bits (67), Expect = 0.55
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 236 DYIRHPVLHELGVKYGIKTECIP-EIALPSKLEELKDVIRREIRKELKIKEGAEKLREV 409
D R P+ HE ++ ++TE + +PS L +L++ RE++ L K G+ K E+
Sbjct: 1110 DARRSPIEHE-NKEWTLRTELLAARPQMPSSLRQLREQPHREVQLALNAKWGSSKKSEI 1167
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 30.3 bits (65), Expect = 0.95
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 236 DYIRHPVLHELGVKYGIKTECIP-EIALPSKLEELKDVIRREIRKELKIKEGAEKLREV 409
D R P+ HE ++ ++TE + +PS L +L++ RE++ L K G+ K E+
Sbjct: 1110 DARRSPMEHE-NKEWTLRTELLAARPQMPSSLRQLREQPHREVQLALNAKWGSSKKSEI 1167
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 308 IALPSKLEELKDVIRREIRKELKIKEGAEKLREVPT 415
I++ S+LEELK + R IR E + + EKL+ T
Sbjct: 779 ISVKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVT 814
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 308 IALPSKLEELKDVIRREIRKELKIKEGAEKLREVPT 415
I++ S+LEELK + R IR E + + EKL+ T
Sbjct: 781 ISVKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVT 816
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 236 DYIRHPVLHELGVKYGIKTECIP-EIALPSKLEELKDVIRREIRKELKIKEGAEKLREV 409
D R P+ HE ++ ++TE + +PS L +L++ RE++ K G+ K E+
Sbjct: 1110 DARRSPMEHE-NKEWTLRTELLAARPQMPSSLRQLREQPHREVQLAFNAKWGSSKKSEI 1167
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 236 DYIRHPVLHELGVKYGIKTECIP-EIALPSKLEELKDVIRREIRKELKIKEGAEKLREV 409
D R P+ HE ++ ++TE + +PS L +L++ RE++ K G+ K E+
Sbjct: 1110 DARRSPMEHE-NKEWTLRTELLAARPQMPSSLRQLREQPHREVQLAFNAKWGSSKKSEI 1167
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 308 IALPSKLEELKDVIRREIRKELKIKEGAEKLREVPT 415
I++ S+LEELK + R IR E + + EKL+ T
Sbjct: 781 ISVKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVT 816
>Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical
protein F32H2.3 protein.
Length = 824
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 453 LTILATSDRDLRSVGTSRSFSAPSFILS 370
LT + + DLRS +SRS S P+ ++S
Sbjct: 69 LTTIEEKNEDLRSAASSRSASRPASVMS 96
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 245 RHPVLHELGVKYGIKTECI---PEIALPSKLEELKDVIRREIRKELKIKEGAEKLREV 409
R P+L E ++ ++++ + PE +PS L +L+D RE++ L G++K EV
Sbjct: 1115 RSPILEETK-EWTVRSQLLVVRPE--MPSSLRQLRDQPHREVQLSLTSTWGSQKKSEV 1169
>AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein.
Length = 824
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 453 LTILATSDRDLRSVGTSRSFSAPSFILS 370
LT + + DLRS +SRS S P+ ++S
Sbjct: 69 LTTIEEKNEDLRSAASSRSASRPASVMS 96
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 314 LPSKLEELKDVIRREIRKELKIKEGAEKLREVPTD 418
L + LKD + +E K+ +++EGAE+L + D
Sbjct: 868 LQETVATLKDTVVQEEEKKRQLQEGAERLNKETAD 902
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 314 LPSKLEELKDVIRREIRKELKIKEGAEKLREVPTD 418
L + LKD + +E K+ +++EGAE+L + D
Sbjct: 868 LQETVATLKDTVVQEEEKKRQLQEGAERLNKETAD 902
>Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical
protein ZK1098.8 protein.
Length = 910
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 320 SKLEELKDVIRREIRKELKIKEGAEKLREVPTDRRSLSDVANIVKKANIKLNELKS 487
SKL E K+++ R RK L++ E+L +RR+ + + N +E+KS
Sbjct: 369 SKLREAKELLVR--RKTLQVPLNGEQLFVFENERRTQIHMVKTESEMNYLCSEIKS 422
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 314 LPSKLEELKDVIRREIRKELKIKEGAEKLREVPTD 418
L + LKD + +E K+ +++EGAE+L + D
Sbjct: 868 LQETVATLKDTVVQEEEKKRQLQEGAERLNKETAD 902
>U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
b protein.
Length = 1558
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 245 RHPVLHELGVKYGIKTECI---PEIALPSKLEELKDVIRREIRKELKIKEGAEKLREV 409
R P+L E ++ ++++ + PE +PS L +L+D RE++ L G++K EV
Sbjct: 1115 RSPILEETK-EWTLRSQLLVVRPE--MPSSLRQLRDQPHREVQLSLTSTWGSQKKSEV 1169
>U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
a protein.
Length = 1613
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 245 RHPVLHELGVKYGIKTECI---PEIALPSKLEELKDVIRREIRKELKIKEGAEKLREV 409
R P+L E ++ ++++ + PE +PS L +L+D RE++ L G++K EV
Sbjct: 1115 RSPILEETK-EWTLRSQLLVVRPE--MPSSLRQLRDQPHREVQLSLTSTWGSQKKSEV 1169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,883,034
Number of Sequences: 27780
Number of extensions: 240002
Number of successful extensions: 804
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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