Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31185
(539 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 175 3e-45
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 169 2e-43
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 163 1e-41
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 155 4e-39
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 151 8e-38
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 145 3e-36
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 89 4e-19
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 80 2e-16
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 79 3e-16
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 79 5e-16
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 78 1e-15
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 77 2e-15
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 76 4e-15
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 72 5e-14
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 71 8e-14
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 71 1e-13
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 69 4e-13
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 60 2e-10
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 42 6e-05
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 34 0.015
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.020
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 28 1.0
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 27 1.3
SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr 2... 27 1.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.3
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 4.1
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 25 5.4
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 5.4
SPCC1753.05 |rsm1||RNA export factor Rsm1|Schizosaccharomyces po... 25 7.2
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 175 bits (426), Expect = 3e-45
Identities = 84/161 (52%), Positives = 110/161 (68%), Gaps = 10/161 (6%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M T R K+ +VGDG GKTCLL V+++ FPE YVPTVF+NYV + VDG VE+ALWD
Sbjct: 1 MATELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWD 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 446
TAGQEDY+RLRPLSY ++ L+C++V S S +NV KW E+ HF +S+PI+LVA K
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKA 120
Query: 447 DLRSSDKAV----------VTTQEGKKLKKKIRAAHLVECS 539
DLR+ K + VTT+EG+ + +KI A +ECS
Sbjct: 121 DLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECS 161
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 169 bits (411), Expect = 2e-43
Identities = 79/161 (49%), Positives = 109/161 (67%), Gaps = 10/161 (6%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M T R K+ +VGDG GKTCLL V+++ FPE YVPTVF+NYV + VDG +E+ALWD
Sbjct: 1 MTTELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWD 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 446
TAGQEDY+RLRPLSY ++ L+C+SV + S +NV KW E+ HF +++PI+LV K+
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKV 120
Query: 447 DLRSSDKAV----------VTTQEGKKLKKKIRAAHLVECS 539
DLR+ K + +T +EG+ + +KI A +ECS
Sbjct: 121 DLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECS 161
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 163 bits (396), Expect = 1e-41
Identities = 78/155 (50%), Positives = 103/155 (66%), Gaps = 10/155 (6%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
+K VVGDG VGKTCLL YT N+FP +YVPTVFDNY + + E + L+DTAGQED
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQED 63
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 464
Y+RLRPLSY QT+ FLVC+SV S +S+ENV KW+PE+ H VP ++V T+IDLR
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDP 123
Query: 465 KA----------VVTTQEGKKLKKKIRAAHLVECS 539
+T ++G++L +++ A VECS
Sbjct: 124 SVQQKLARQHQHPLTHEQGERLARELGAVKYVECS 158
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 155 bits (376), Expect = 4e-39
Identities = 71/150 (47%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 287
KI ++GDG GKT LL V+T+ FP+ Y PT+F+NY+ I VDG +E++LWDTAGQE+Y
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 288 ERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSDK 467
++LR LSY+ T+ ++C++V SR S ENV+ KW PE+ V +VLVA K DLR +D+
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADE 134
Query: 468 ------AVVTTQEGKKLKKKIRAAHLVECS 539
++ +EG KKI A +ECS
Sbjct: 135 EQVDHSKIIDYEEGLAAAKKINAVRYLECS 164
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 151 bits (365), Expect = 8e-38
Identities = 71/130 (54%), Positives = 90/130 (69%), Gaps = 4/130 (3%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITV--DGEDVEMALWDTAGQE 281
K+ VVGDG GKTCLL V++ FPE YVPTVF+NY+ IT + + +E+ALWDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 461
+Y+RLRPLSY +N L+C+S+ +S NV KWYPE++HF PIVLV K DLR
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 462 DKA--VVTTQ 485
A V+ TQ
Sbjct: 136 RNATEVLRTQ 145
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 145 bits (352), Expect = 3e-36
Identities = 74/156 (47%), Positives = 98/156 (62%), Gaps = 10/156 (6%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQE 281
R K+ VVGDG GKT LL V+T FP EYVPTVF+NYV VDG+ V++ALWDTAGQE
Sbjct: 8 RRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQE 67
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 461
+YERLRP+SY + + LV +++ S S ENV KW E+ +VP +LV K DLRS
Sbjct: 68 EYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSD 127
Query: 462 DKAV----------VTTQEGKKLKKKIRAAHLVECS 539
A+ V +Q+ + + ++I A +ECS
Sbjct: 128 PVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECS 163
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 89.0 bits (211), Expect = 4e-19
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ K+ VVGDG VGK+ L ++ F +EY PT+ D+Y +DGE + + DTAGQ
Sbjct: 7 REYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQ 66
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF--SASVPIVLVATKIDL 452
E+Y +R FL+ Y++ SRSS++ + +Y ++ + P+VLVA K DL
Sbjct: 67 EEYSAMREQYMRTGEGFLLVYNITSRSSFDE-ISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 453 RSSDKAVVTTQEGKKLKKKIRAAHL 527
+ + VV+ EG++L K + ++
Sbjct: 126 EA--ERVVSRAEGEQLAKSMHCLYV 148
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 80.2 bits (189), Expect = 2e-16
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Frame = +3
Query: 87 MGTTKR--LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMA 257
M KR LK+ ++GD VGKTCL+ + +F EY T+ +++ + VD + V +
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 258 LWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA----SVPI 425
LWDTAGQE ++ L Y +C ++ Y+V + S+++ V W E + ++ + P
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDS-VENWRQEFLYQTSQDECAFPF 119
Query: 426 VLVATKIDLRSSDKAV 473
++V +ID +S +AV
Sbjct: 120 IIVGNQIDKDASKRAV 135
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 79.4 bits (187), Expect = 3e-16
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ +VGDG GKT + + EF ++Y+ T+ + + H + ++ +WDTAGQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 464
LR Y Q C ++ + V SR +Y+NV H W+ +L ++PIVL K+D++
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNVPH-WWRDLVRVCENIPIVLCGNKVDVKERK 129
Query: 465 -KAVVTTQEGKK 497
KA T KK
Sbjct: 130 VKAKAITFHRKK 141
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 78.6 bits (185), Expect = 5e-16
Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M K +I V+G VGK+ L Y N F E Y PT+ + + +I G++ + D
Sbjct: 1 MAPIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIID 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATK 443
TAGQ++Y L + +++ YS+ S+SS+E V L H VPIV+V K
Sbjct: 61 TAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNK 120
Query: 444 IDLRSSDKAVVTTQEGKKLKKKIRAA 521
DL + VT +EGK L + + A
Sbjct: 121 SDLHM--QRAVTAEEGKALANEWKCA 144
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 77.8 bits (183), Expect = 1e-15
Identities = 40/138 (28%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQE 281
+K+ ++GD VGK+CLL ++ + F ++ T+ D + I +DG+ +++ +WDTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSASVPIVLVATKIDLRS 458
+ + Y L+ Y V + S++N V W+ + +H S +V +L+ K D
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDN-VRTWFSNVEQHASENVYKILIGNKCD--C 126
Query: 459 SDKAVVTTQEGKKLKKKI 512
D+ V+ ++G+ L ++
Sbjct: 127 EDQRQVSFEQGQALADEL 144
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 76.6 bits (180), Expect = 2e-15
Identities = 43/145 (29%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAG 275
++ K+ +G+ VGKT L+ + ++F Y T+ +++ + ++ V + LWDTAG
Sbjct: 10 RKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 69
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDL 452
QE + L P ++ ++ Y + + +S+ N KW +++ V IVLV K DL
Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKTDL 128
Query: 453 RSSDKAVVTTQEGKKLKKKIRAAHL 527
+DK VT +EG+K K+++ H+
Sbjct: 129 --ADKRQVTQEEGEKKAKELKIMHM 151
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 75.8 bits (178), Expect = 4e-15
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQED 284
K ++GD VGK+ LL +TRNEF E T+ + +I +D + ++ +WDTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDL 452
Y + Y L+ Y + +SS++N V +W EL+ H +++ I+LV K DL
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDN-VGRWLKELREHADSNIVIMLVGNKTDL 127
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 72.1 bits (169), Expect = 5e-14
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ ++GD VGK+CLL + + + E Y+ T+ D + ++G+ V++ +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA-SVPIVLVATKIDLRSS 461
+ + Y + ++ Y V + S+ N V +W E+ ++ V +LV K D+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNN-VKQWLQEIDRYAVEGVNRLLVGNKSDM--V 126
Query: 462 DKAVVTTQEGKKLKKKIRAAHL 527
DK VV K+ + L
Sbjct: 127 DKKVVEYSVAKEFADSLNIPFL 148
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 71.3 bits (167), Expect = 8e-14
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Frame = +3
Query: 66 SDVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVD-G 239
S+ A + + T + K+ ++GD VGK+ L+ + +++F + T+ ++ + +D
Sbjct: 3 SNTAPKNVVTINQ-KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDEN 61
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSAS 416
V++ +WDTAGQE Y+ L P+ Y NC +V Y + +S E W EL +
Sbjct: 62 TSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEK-AKSWIKELQRQAPEG 120
Query: 417 VPIVLVATKIDLRSSDKAV 473
+ I L K+DL +AV
Sbjct: 121 IVIALAGNKLDLAQERRAV 139
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 70.9 bits (166), Expect = 1e-13
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQE 281
+K+ ++GD +GKT L+ Y + F EE T+ N++ I++ ++ ++WD GQ
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQR 70
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKID---- 449
++ + P+ L + + SR S N + +WY + + F+ + +L+ TK D
Sbjct: 71 EFVNMLPMVCNDAVAILFMFDL-SRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDHFMT 129
Query: 450 LRSSDKAVVTTQEGKKLKKKIRAAHLVECS 539
D+ +T Q ++ K ++A+ LV CS
Sbjct: 130 FPREDQEEITKQ-ARRYAKAMKAS-LVFCS 157
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 68.9 bits (161), Expect = 4e-13
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQE 281
LK+ ++G+ VGKT ++ Y +F ++Y T+ +++ + VD + V + LWDTAGQE
Sbjct: 9 LKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQE 68
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPE-LKHFSAS----VPIVLVATKI 446
++ L Y +C ++ Y V + S+E + W E L S S P +L+ K+
Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNNSKSFE-TLDSWRDEFLIQASPSNPETFPFILLGNKV 127
Query: 447 DLRSSDKAV 473
D+ + V
Sbjct: 128 DVEEQKRMV 136
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 60.1 bits (139), Expect = 2e-10
Identities = 39/148 (26%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDG-----EDVEMALWDT 269
+KI + G GK+CLL + +N++ ++ TV ++ I G + +++ +WDT
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 270 AGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATKI 446
AGQE + + Y ++ Y V ++ S+E + W +++ + S + +VL +K
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEE-LSSWLSDIRAMAPSTICVVLAGSKS 128
Query: 447 DLRSSDKAVVTTQEGKKL--KKKIRAAH 524
DL++ + V+T+E + +K I +AH
Sbjct: 129 DLQNQRQ--VSTEEAAEFCSEKHISSAH 154
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 41.9 bits (94), Expect = 6e-05
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDG-EDVEMALWDTAG 275
K +++ + GD VGK+ L+ + + +P VF D +DV + L DT
Sbjct: 2 KEVRVVICGDQGVGKSSLISALIQEDNVTS-IPKVFPIISIPSNPDSNDDVSLVLVDT-- 58
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATK 443
Q D L+ ++C SYE V W P + +VPIVL K
Sbjct: 59 QSDSNEREYLAAEIKKANVICLVYSDNYSYERVSIFWLPYFRSLGVNVPIVLCENK 114
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 33.9 bits (74), Expect = 0.015
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ ++I +VG GKT +LY E +PT+ N TV+ ++ +WD GQ
Sbjct: 16 REMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYRNISFTVWDVGGQ 71
Query: 279 EDYERLRPL 305
+++RPL
Sbjct: 72 ---DKIRPL 77
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.5 bits (73), Expect = 0.020
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +3
Query: 93 TTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTA 272
+ K ++I ++G GKT +LY N+ +PTV N TV ++++ +WD
Sbjct: 18 SNKEMRILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVE---TVTYKNIKFNVWDVG 73
Query: 273 GQEDYERLRPL 305
GQ +++RPL
Sbjct: 74 GQ---DKIRPL 81
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +3
Query: 3 IIFKCLYNRVLKR-----EFCGDIGLSDVAARTMGTTKRLKITVVGDGMVGKTCLLY 158
I+ K Y +L+R +FC D+GL MG ++ G+TC+++
Sbjct: 46 IVAKYTYTELLRRVNTIAKFCDDLGLGKTVGIHMGHELDFLCSIFALWATGRTCVIF 102
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 145 VLPTIPSPTTVIFNLFVVPMVRAATSDKPISPQNS 41
V P +P ++ L VV M + +T+D I P+N+
Sbjct: 113 VSPAVPITFAYLYALAVVSMFKCSTADPGILPRNA 147
>SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 338
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 169 LVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATSDKPISP 50
L + ++ VLPT T V++NL + ++ A PI+P
Sbjct: 206 LATSKARSVLPTSYGRTDVVYNLQRLALLTTALGQTPINP 245
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 1.3
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -2
Query: 280 SCPAVSHNAISTSSPSTVMWPT*-LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFN 104
S P S +++ SS S + + LS+++ T +S + TYS V+P+ + + +
Sbjct: 626 SSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSS--LSTYSSSVIPSSSTLVSSSSS 683
Query: 103 LFVVPMVRAATSDKPISPQNSRFKT 29
L V A++S PI +S T
Sbjct: 684 LIVSSSPVASSSSSPIPSSSSLVST 708
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 4.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -2
Query: 268 VSHNAISTSSPSTVMWP-T*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVV 92
VS +ST P + ++P T ++ T G ++F T S Q P+ T V + +
Sbjct: 1411 VSSTVVSTVVPGSTVYPVTHVTTTTGVSGESSAFTYTTSSTQYEPS----TVVTTSYYTT 1466
Query: 91 PMVRAATSDKPIS 53
+ +A + + +S
Sbjct: 1467 SVYTSAPATETVS 1479
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 25.4 bits (53), Expect = 5.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 322 FVCVYDSGLNRS*SSCPAVSHNAISTSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYS 152
F YD L + C ++HN +S SPS V++ +T+ Y +S + T+S
Sbjct: 281 FAFRYDKSLGKF---CSFLNHNLLSLCSPSGVLFGHNDIDTIYVYILTHSGTLETFS 334
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 118 TVIFNLFVVPMVRAATSDKPISPQNSRFKTLLYKH 14
T I N+F+ P+V+A T + ++ + +L KH
Sbjct: 1340 TSIVNVFITPLVKARTFPESLTTYHLDLLLVLSKH 1374
>SPCC1753.05 |rsm1||RNA export factor Rsm1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 296
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 375 VHKWYPELKHFSASVPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLV 530
+HK+ P++ H S S +V V + + S+ E LK+ + A+ +
Sbjct: 134 LHKFPPDIYHLSVSAELVQVGRRFNSLSTRLVSTHLPEEMTLKRLEKVANKI 185
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,235,791
Number of Sequences: 5004
Number of extensions: 46307
Number of successful extensions: 162
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 221892220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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