Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31174
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 58 5e-09
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 58 5e-09
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 58 5e-09
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 35 0.050
Z46996-5|CAA87096.1| 268|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine re... 32 0.47
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 31 1.1
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 31 1.1
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 31 1.1
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 31 1.1
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68114-9|CAA92156.1| 320|Caenorhabditis elegans Hypothetical pr... 28 5.7
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/91 (34%), Positives = 47/91 (51%)
Frame = +2
Query: 152 FRCIPLFKCNRQVESVDKRHCSLPTVPEDIXXXXXXXXXXXXDANHIRDLPKNFFXXXXX 331
F C+P+ C RQV+S+D+ +L +P DI N+I++L F
Sbjct: 4 FFCLPM-ACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLT-MNNIKELDHRLFSLRHL 61
Query: 332 XXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
SDNE+ LPA+I N L+EL+++RN
Sbjct: 62 RILDVSDNELAVLPAEIGNLTQLIELNLNRN 92
Score = 36.3 bits (80), Expect = 0.022
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 146 NMFRCIPLFKCN-RQVESVDKRHCSLPTVPEDIXXXXXXXXXXXXDANHIRDLPKNFFXX 322
N+ R IPL R++E +D L +P +I D N + LP +
Sbjct: 161 NLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYV-DINSLTSLPDSISGC 219
Query: 323 XXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
S+N+I +LP ++ NL +L++S N
Sbjct: 220 RMLDQLDVSENQIIRLPENLGRMPNLTDLNISIN 253
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 278 DANHIRDLPKNFFXXXXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
D N++ D+P N + +LP I ENL LDV+ N
Sbjct: 320 DCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASN 368
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/91 (34%), Positives = 47/91 (51%)
Frame = +2
Query: 152 FRCIPLFKCNRQVESVDKRHCSLPTVPEDIXXXXXXXXXXXXDANHIRDLPKNFFXXXXX 331
F C+P+ C RQV+S+D+ +L +P DI N+I++L F
Sbjct: 4 FFCLPM-ACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLT-MNNIKELDHRLFSLRHL 61
Query: 332 XXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
SDNE+ LPA+I N L+EL+++RN
Sbjct: 62 RILDVSDNELAVLPAEIGNLTQLIELNLNRN 92
Score = 36.3 bits (80), Expect = 0.022
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 146 NMFRCIPLFKCN-RQVESVDKRHCSLPTVPEDIXXXXXXXXXXXXDANHIRDLPKNFFXX 322
N+ R IPL R++E +D L +P +I D N + LP +
Sbjct: 161 NLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYV-DINSLTSLPDSISGC 219
Query: 323 XXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
S+N+I +LP ++ NL +L++S N
Sbjct: 220 RMLDQLDVSENQIIRLPENLGRMPNLTDLNISIN 253
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 278 DANHIRDLPKNFFXXXXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
D N++ D+P N + +LP I ENL LDV+ N
Sbjct: 320 DCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASN 368
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/91 (34%), Positives = 47/91 (51%)
Frame = +2
Query: 152 FRCIPLFKCNRQVESVDKRHCSLPTVPEDIXXXXXXXXXXXXDANHIRDLPKNFFXXXXX 331
F C+P+ C RQV+S+D+ +L +P DI N+I++L F
Sbjct: 4 FFCLPM-ACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLT-MNNIKELDHRLFSLRHL 61
Query: 332 XXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
SDNE+ LPA+I N L+EL+++RN
Sbjct: 62 RILDVSDNELAVLPAEIGNLTQLIELNLNRN 92
Score = 36.3 bits (80), Expect = 0.022
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 146 NMFRCIPLFKCN-RQVESVDKRHCSLPTVPEDIXXXXXXXXXXXXDANHIRDLPKNFFXX 322
N+ R IPL R++E +D L +P +I D N + LP +
Sbjct: 161 NLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYV-DINSLTSLPDSISGC 219
Query: 323 XXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
S+N+I +LP ++ NL +L++S N
Sbjct: 220 RMLDQLDVSENQIIRLPENLGRMPNLTDLNISIN 253
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 278 DANHIRDLPKNFFXXXXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
D N++ D+P N + +LP I ENL LDV+ N
Sbjct: 320 DCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASN 368
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 35.1 bits (77), Expect = 0.050
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +2
Query: 167 LFKCNRQVESVDKRHCSLPTVPEDIXXXXXXXXXXXXDANHIRDLPKNFFXXXXXXXXXX 346
LF+ R ++ ++ C + TVPE + I D P+ F
Sbjct: 89 LFQGFRNLDRLELDRCLIDTVPEGLFAGLGQLYSLIVKNAKITDFPREIFAHVPNLMTLD 148
Query: 347 -SDNEIHKLPADIQNFENLVELDVSRN 424
S N + P +++ +NL+ LDVS N
Sbjct: 149 LSGNRLRIEPYSLRSLQNLIHLDVSDN 175
>Z46996-5|CAA87096.1| 268|Caenorhabditis elegans Hypothetical
protein C34C12.5 protein.
Length = 268
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 293 RDLPKNFFXXXXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
R LP NFF DN+ LP D++N NL L + N
Sbjct: 117 RSLPGNFFFMQTLRALYLGDNDFEMLPGDVENLTNLQILVLREN 160
>AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine
receptor, class i protein54 protein.
Length = 335
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/75 (21%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 398 LVELDVSRNGKYIFH*CFTVMPCLYGYMRIKIIMYQSPDHKNCIL---TRQNYYKSKNMK 568
+V + V NG + F ++ CL+ + + +++ P ++ ++ R+N KSK +
Sbjct: 260 VVVIMVGLNGSQLIVEVFLMVACLHSTLNVIVLIVTCPPYRRFLIQLVQRKNSPKSKGAR 319
Query: 569 EIKLKKFNIYLNNFH 613
+ ++ I ++NF+
Sbjct: 320 SVLVRNSAIAISNFN 334
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 284 NHIRDLPKNFFXXXXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
N ++ LP++ S+N++ KLP I N L ELD+ N
Sbjct: 385 NQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEEN 431
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 284 NHIRDLPKNFFXXXXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
N ++ LP++ S+N++ KLP I N L ELD+ N
Sbjct: 384 NQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEEN 430
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 284 NHIRDLPKNFFXXXXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
N ++ LP++ S+N++ KLP I N L ELD+ N
Sbjct: 385 NQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEEN 431
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 284 NHIRDLPKNFFXXXXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
N ++ LP++ S+N++ KLP I N L ELD+ N
Sbjct: 385 NQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEEN 431
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical
protein F43C1.1 protein.
Length = 1036
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 281 ANHIRDLPKNFFXXXXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
+N+I +P S+N++ LP I +NL LD+S N
Sbjct: 229 SNYISSVPSECSNMRRLQYLNLSNNQLDTLPDSISELQNLQSLDISFN 276
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Frame = +2
Query: 155 RCIPLFKCNRQVESVDKRHCSLPTVPEDIXXXXXXXXXXXXDA-----NHIRDLPKNFFX 319
R + +F +Q++S++ R CSL +P NH+ P F
Sbjct: 187 RDLDVFSKLKQLQSLEMRSCSLELIPVPAMCTMFRELPTSISLLDFGDNHLSIFPP-IFH 245
Query: 320 XXXXXXXXXSDNEIHKLPADIQNFENLVELDVSRN 424
+ N I LP+ I +NL +DVS N
Sbjct: 246 LKQLKIINAAHNAIKYLPSRIGVLQNLNTIDVSNN 280
>Z68114-9|CAA92156.1| 320|Caenorhabditis elegans Hypothetical
protein F17A2.12 protein.
Length = 320
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 410 DVSRNGKYIFH*CFTVMPCLYGYMRIKIIMYQSPDH 517
D+ R+ YIF+ F + + M I +I Y SP H
Sbjct: 4 DIYRDVLYIFYPIFFIFSTITQLMLIYLIFYHSPTH 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,787,560
Number of Sequences: 27780
Number of extensions: 298852
Number of successful extensions: 908
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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