Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31174
         (712 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   2.2  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   3.8  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   3.8  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   3.8  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   3.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.7  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   8.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.7  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 66  YFGLVNTIAIQCFSLKQQL 10
           +FGLVN  AI C++  Q L
Sbjct: 319 FFGLVNNSAIGCWNEHQPL 337


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 153 NMLNTTLHINYNRIKHYNDTYLSTSIK*CYFGL 55
           ++ N T+H N N   +YN+   + + K  Y+ +
Sbjct: 84  SLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 153 NMLNTTLHINYNRIKHYNDTYLSTSIK*CYFGL 55
           ++ N T+H N N   +YN+   + + K  Y+ +
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 153 NMLNTTLHINYNRIKHYNDTYLSTSIK*CYFGL 55
           ++ N T+H N N   +YN+   + + K  Y+ +
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 153 NMLNTTLHINYNRIKHYNDTYLSTSIK*CYFGL 55
           ++ N T+H N N   +YN+   + + K  Y+ +
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -3

Query: 566 SYSLTYNSSVWLKYN 522
           ++ + YN++VW ++N
Sbjct: 118 TFDVFYNTAVWARFN 132


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/49 (20%), Positives = 23/49 (46%)
 Frame = -2

Query: 246 RKMSSGTVGNEQCRLSTLSTWRLHLNKGIHRNMLNTTLHINYNRIKHYN 100
           ++ S      E+C+   + +   +  K  + N  N   + NY ++++YN
Sbjct: 64  KERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYN 112


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/49 (20%), Positives = 23/49 (46%)
 Frame = -2

Query: 246 RKMSSGTVGNEQCRLSTLSTWRLHLNKGIHRNMLNTTLHINYNRIKHYN 100
           ++ S      E+C+   + +   +  K  + N  N   + NY ++++YN
Sbjct: 64  KERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYN 112


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/49 (20%), Positives = 23/49 (46%)
 Frame = -2

Query: 246 RKMSSGTVGNEQCRLSTLSTWRLHLNKGIHRNMLNTTLHINYNRIKHYN 100
           ++ S      E+C+   + +   +  K  + N  N   + NY ++++YN
Sbjct: 64  KERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYN 112


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/49 (20%), Positives = 23/49 (46%)
 Frame = -2

Query: 246 RKMSSGTVGNEQCRLSTLSTWRLHLNKGIHRNMLNTTLHINYNRIKHYN 100
           ++ S      E+C+   + +   +  K  + N  N   + NY ++++YN
Sbjct: 64  KERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYN 112


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/49 (20%), Positives = 23/49 (46%)
 Frame = -2

Query: 246 RKMSSGTVGNEQCRLSTLSTWRLHLNKGIHRNMLNTTLHINYNRIKHYN 100
           ++ S      E+C+   + +   +  K  + N  N   + NY ++++YN
Sbjct: 64  KERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYN 112


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/49 (20%), Positives = 23/49 (46%)
 Frame = -2

Query: 246 RKMSSGTVGNEQCRLSTLSTWRLHLNKGIHRNMLNTTLHINYNRIKHYN 100
           ++ S      E+C+   + +   +  K  + N  N   + NY ++++YN
Sbjct: 64  KERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYN 112


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/49 (20%), Positives = 23/49 (46%)
 Frame = -2

Query: 246 RKMSSGTVGNEQCRLSTLSTWRLHLNKGIHRNMLNTTLHINYNRIKHYN 100
           ++ S      E+C+   + +   +  K  + N  N   + NY ++++YN
Sbjct: 64  KERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYN 112


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -3

Query: 566 SYSLTYNSSVWLKYN 522
           ++ + YN++VW ++N
Sbjct: 118 TFDVFYNTAVWARFN 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,681
Number of Sequences: 438
Number of extensions: 3740
Number of successful extensions: 25
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)