Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31164
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...   161   3e-40
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    34   0.11 
CU457740-7|CAM36337.1|  363|Caenorhabditis elegans Hypothetical ...    31   0.77 
U23523-7|AAC46562.2|   85|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    29   2.4  
AL161712-7|CAC70132.1|  235|Caenorhabditis elegans Hypothetical ...    29   3.1  
AC024211-4|AAP82631.1|  487|Caenorhabditis elegans Hypothetical ...    28   5.4  
Z68106-8|CAA92125.2|  558|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z49153-3|CAD30426.1|  558|Caenorhabditis elegans Hypothetical pr...    28   7.2  
CU457737-8|CAM36329.1|  811|Caenorhabditis elegans Hypothetical ...    28   7.2  
U23523-6|AAC46561.1|   86|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score =  161 bits (392), Expect = 3e-40
 Identities = 69/95 (72%), Positives = 85/95 (89%)
 Frame = +3

Query: 3   NSYSSYDRFCPFYKTVGMLKNIITFYDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLS 182
           N Y+ YDRFCPFYKTVGMLKN+I FYD++RHAVE+TAQSDNK+TWNVI+D+MG+++YQLS
Sbjct: 512 NGYTKYDRFCPFYKTVGMLKNMIGFYDLARHAVEATAQSDNKITWNVIKDSMGDLIYQLS 571

Query: 183 SMKFKDPVKDGEPKIKADFDQLLEDMSAAFRNLED 287
           +MKFKDPV DGE KI+ D++ L E M+ AFRNLED
Sbjct: 572 AMKFKDPVADGEAKIRKDYEDLAEAMANAFRNLED 606


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 15/37 (40%), Positives = 15/37 (40%)
 Frame = +2

Query: 50  GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 160
           GH  EHHH   H    G  H A    GH   H   HG
Sbjct: 456 GHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHG 492



 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
 Frame = +2

Query: 50  GHAEEHHHVLRHVAARG-----GVH-GAVRQQGHVERHPRRHGQRALPALLHEVQG 199
           GH  EHHH   H    G     GVH G     GH    P  HG      + H   G
Sbjct: 562 GHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617



 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
 Frame = +2

Query: 50  GHAEEHHHVLRHVAARG--GVHGAVRQQGHVERHPRRHGQ 163
           GH  EHHH   H    G  G H       H   H   HG+
Sbjct: 527 GHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGE 566



 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +2

Query: 50  GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 160
           GH  EHHH   H       HG     GH    P  HG
Sbjct: 427 GHHGEHHHAPAH-------HGHHESHGHGHHSPAHHG 456


>CU457740-7|CAM36337.1|  363|Caenorhabditis elegans Hypothetical
           protein C50E10.7 protein.
          Length = 363

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -2

Query: 415 IIFATTHKISFGHSEYFLFTLKLISVNFSVSITIIF*RQYSV*SSRLRK 269
           IIF TT+ I F   ++    + L+ +N S  I     RQYS+   RL K
Sbjct: 175 IIFTTTYLIFFNKLQFIPIIIFLVVINTSAMIGFFLNRQYSLKILRLFK 223


>U23523-7|AAC46562.2|   85|Caenorhabditis elegans Hypothetical
           protein F53A9.7 protein.
          Length = 85

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +2

Query: 50  GHAEEHHHVLRHVAAR-GGVHGAVRQQGHVERHPRRHG 160
           GH + HHH   H     GG HG    + H E H   HG
Sbjct: 44  GHVDTHHHEESHHGEHHGGHHGVQHYESHHESH--HHG 79


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +2

Query: 50  GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 160
           GH     H   H   R G HG      H  R P RHG
Sbjct: 378 GHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414


>AL161712-7|CAC70132.1|  235|Caenorhabditis elegans Hypothetical
           protein Y66D12A.10 protein.
          Length = 235

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = -2

Query: 469 TLHSFVRN*SRCCDDKISIIFATTHKISFGHSEYFLFTLKLISVNFSVSITII 311
           T HS+ R   +CCDD++ ++      IS  H          + V  SV++ +I
Sbjct: 93  TGHSYARIFGKCCDDRLRMVHVQDAYISAHHQLVNFVRFCELVVPLSVNLLVI 145


>AC024211-4|AAP82631.1|  487|Caenorhabditis elegans Hypothetical
           protein Y76B12C.6 protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 98  GGVHGAVRQQGHVERHPRRHGQR 166
           GG+HGA +QQ  V + P  H Q+
Sbjct: 443 GGIHGAQQQQQAVRKRPDSHQQQ 465


>Z68106-8|CAA92125.2|  558|Caenorhabditis elegans Hypothetical
           protein F41E7.2 protein.
          Length = 558

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 436 CCDDKIS--IIFATTHKISFGHSEYFLFTLKLI 344
           CC D +   +IF+ T  ++F H  +FL  +K I
Sbjct: 226 CCFDNVVSLLIFSVTSSVTFTHDAFFLTMVKSI 258


>Z49153-3|CAD30426.1|  558|Caenorhabditis elegans Hypothetical
           protein F41E7.2 protein.
          Length = 558

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 436 CCDDKIS--IIFATTHKISFGHSEYFLFTLKLI 344
           CC D +   +IF+ T  ++F H  +FL  +K I
Sbjct: 226 CCFDNVVSLLIFSVTSSVTFTHDAFFLTMVKSI 258


>CU457737-8|CAM36329.1|  811|Caenorhabditis elegans Hypothetical
           protein C52D10.12 protein.
          Length = 811

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -2

Query: 481 NSIITLHSFVRN*SRCCDDKISIIFATTH-KISFGHSEYFLFTLKLI 344
           N +  +H  +   +  C +   +I A  H K+ F H   F  TLKL+
Sbjct: 107 NHLDKIHQIIWTFTNNCSEPAYVIDALNHFKVHFNHKATFHLTLKLL 153


>U23523-6|AAC46561.1|   86|Caenorhabditis elegans Hypothetical
           protein F53A9.6 protein.
          Length = 86

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
 Frame = +2

Query: 50  GHAEEHHH--VLRHVAARGGVHGAVRQQGHVERHPRRHG 160
           GH + HHH     H    GG HG    + H E H   HG
Sbjct: 45  GHMDTHHHHDSHHHGGHHGGHHGG-HYESHYESH-HHHG 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,148,216
Number of Sequences: 27780
Number of extensions: 288560
Number of successful extensions: 779
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)