Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31155
(366 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 186 9e-49
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 186 9e-49
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 186 9e-49
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 103 7e-24
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 101 3e-23
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 60 1e-10
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 1e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 37 0.001
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 36 0.002
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 33 0.010
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 33 0.010
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.17
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 23 1.0
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 27 1.2
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 2.1
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 2.1
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 25 2.8
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 3.7
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 3.7
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 25 3.7
SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr 1|||M... 25 3.7
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 4.9
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 24 8.5
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 24 8.5
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 186 bits (453), Expect = 9e-49
Identities = 86/98 (87%), Positives = 90/98 (91%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
+EK HIN+VVIGHVDSGKSTTTG LIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFXTSKXYVTIIDAPGHRDXIK 343
LKAERERGITIDIALWKF T K VT+IDAPGHRD IK
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIK 100
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 186 bits (453), Expect = 9e-49
Identities = 86/98 (87%), Positives = 90/98 (91%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
+EK HIN+VVIGHVDSGKSTTTG LIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFXTSKXYVTIIDAPGHRDXIK 343
LKAERERGITIDIALWKF T K VT+IDAPGHRD IK
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIK 100
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 186 bits (453), Expect = 9e-49
Identities = 86/98 (87%), Positives = 90/98 (91%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
+EK HIN+VVIGHVDSGKSTTTG LIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFXTSKXYVTIIDAPGHRDXIK 343
LKAERERGITIDIALWKF T K VT+IDAPGHRD IK
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIK 100
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 103 bits (248), Expect = 7e-24
Identities = 47/95 (49%), Positives = 64/95 (67%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 235
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 236 AERERGITIDIALWKFXTSKXYVTIIDAPGHRDXI 340
ER RG+T+D+A F + K I DAPGHRD I
Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFI 269
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 101 bits (243), Expect = 3e-23
Identities = 44/95 (46%), Positives = 64/95 (67%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 235
K H+NIV IGHVD+GKST G +++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 236 AERERGITIDIALWKFXTSKXYVTIIDAPGHRDXI 340
ERE+G T+++ F T +++DAPGH+ +
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYV 330
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 59.7 bits (138), Expect = 1e-10
Identities = 37/100 (37%), Positives = 51/100 (51%)
Frame = +2
Query: 44 WAREKTHINIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
+ R+K H+NI IGHVD GK+T T I KC ++G+ SF +
Sbjct: 47 FVRKKPHVNIGTIGHVDHGKTTLTAA-ITKC--------------LSDLGQASFMDYSQI 91
Query: 224 DKLKAERERGITIDIALWKFXTSKXYVTIIDAPGHRDXIK 343
DK E+ RGITI A ++ T+ + +D PGH D IK
Sbjct: 92 DKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIK 131
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.6 bits (113), Expect = 1e-07
Identities = 31/89 (34%), Positives = 44/89 (49%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 247
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 248 RGITIDIALWKFXTSKXYVTIIDAPGHRD 334
RGITI+ A F + +ID PGH D
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHAD 105
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 36.7 bits (81), Expect = 0.001
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 247
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 248 RGITIDI----ALWKFXTSKXYVTIIDAPGHRD 334
RGIT+ ++ + + +ID PGH D
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVD 136
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 35.9 bits (79), Expect = 0.002
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 247
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 248 RGITIDIA 271
+GITI A
Sbjct: 111 KGITIQSA 118
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 33.5 bits (73), Expect = 0.010
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGXLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKA 238
N+ VI HVD GKST T L+ K G I K +F + A E +G + + L A
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAIS-LFA 79
Query: 239 ERERGITIDIALWKFXTSKXYVTIIDAPGHRD 334
E D+ T V +ID+PGH D
Sbjct: 80 EMTDDDMKDMKEPADGTD-FLVNLIDSPGHVD 110
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 33.5 bits (73), Expect = 0.010
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGXLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKA 238
N+ VI HVD GKST T L+ K G I K +F + A E +G + + L A
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAIS-LFA 79
Query: 239 ERERGITIDIALWKFXTSKXYVTIIDAPGHRD 334
E D+ T V +ID+PGH D
Sbjct: 80 EMTDDDMKDMKEPADGTD-FLVNLIDSPGHVD 110
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.5 bits (63), Expect = 0.17
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 261 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 133
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 23.0 bits (47), Expect(2) = 1.0
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 191 GKGSFKYAWVLDKLKAERERGITIDIALWK--FXTSKXYVTIIDAPGH 328
GK + A+ + + GIT I + F ++T +D PGH
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGH 230
Score = 22.2 bits (45), Expect(2) = 1.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 71 IVVIGHVDSGKST 109
+ ++GHVD GK+T
Sbjct: 174 VTLMGHVDHGKTT 186
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 1.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 17 SL*SVTNQKWAREKTHINIVVIGHVDSGKSTTTGXL 124
S+ S N+K R N++V+G SGKST L
Sbjct: 17 SITSQINRKLIRRGFQFNVMVVGPSGSGKSTLINTL 52
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 2.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 17 SL*SVTNQKWAREKTHINIVVIGHVDSGKSTTTGXLI 127
SL + +++ R+ + N++V+G SGKST L+
Sbjct: 80 SLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLL 116
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 2.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 251 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 153
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 2.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 267 ISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 154
IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 409 ISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 3.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 185 PGPPSRTSRWYVCQYHHIC 129
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.0 bits (52), Expect = 3.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 230 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSXDQWWWT 102
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 25.0 bits (52), Expect = 3.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 44 WAREKTHINIVVIGHVDSGKSTTTGXLIYKCG 139
+A E+ I IV +GH GK+T +Y+ G
Sbjct: 36 YAVEQNQITIV-LGHTGCGKTTQIPQFLYEAG 66
>SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 25.0 bits (52), Expect = 3.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 26 SVTNQKWAREKTHINIVVIGHVDSGKST 109
S+ Q+ R H+ I ++G + GKST
Sbjct: 33 SIVRQRLGRPGNHLKIGIVGMPNIGKST 60
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 24.6 bits (51), Expect = 4.9
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 47 AREKTHINIVVIGHVDSGKST 109
+R+ T INI IGHV GKST
Sbjct: 19 SRQAT-INIGTIGHVAHGKST 38
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 23.8 bits (49), Expect = 8.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 71 IVVIGHVDSGKSTTTGXLIYKC 136
IVV+G SGKST + +C
Sbjct: 115 IVVVGETGSGKSTQIPQFLNEC 136
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 23.8 bits (49), Expect = 8.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGXLIYKCGGIDKR 154
N ++ HVD GK+T L+ G I +
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSK 49
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,289,852
Number of Sequences: 5004
Number of extensions: 21492
Number of successful extensions: 83
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 114084208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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