Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31155
(366 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 196 5e-53
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 195 1e-52
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 88 4e-20
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 55 3e-10
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.21
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.37
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 4.6
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 4.6
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 4.6
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 20 8.0
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 196 bits (479), Expect = 5e-53
Identities = 92/98 (93%), Positives = 93/98 (94%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
+EK HINIVVIGHVDSGKSTTTG LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFXTSKXYVTIIDAPGHRDXIK 343
LKAERERGITIDIALWKF TSK YVTIIDAPGHRD IK
Sbjct: 63 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIK 100
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 195 bits (476), Expect = 1e-52
Identities = 91/98 (92%), Positives = 93/98 (94%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGXLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
+EK HINIVVIGHVDSGKSTTTG LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFXTSKXYVTIIDAPGHRDXIK 343
LKAERERGITIDIALWKF T+K YVTIIDAPGHRD IK
Sbjct: 63 LKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIK 100
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 87.8 bits (208), Expect = 4e-20
Identities = 40/43 (93%), Positives = 40/43 (93%)
Frame = +2
Query: 215 WVLDKLKAERERGITIDIALWKFXTSKXYVTIIDAPGHRDXIK 343
WVLDKLKAERERGITIDIALWKF TSK YVTIIDAPGHRD IK
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIK 43
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 54.8 bits (126), Expect = 3e-10
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +2
Query: 263 DIALWKFXTSKXYVTIIDAPGHRDXIK 343
DIALWKF TSK YVTIIDAPGHRD IK
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIK 27
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.21
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKST 109
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.6 bits (51), Expect = 0.37
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 47 AREKTHINIVVIGHVDSGKST 109
+R+ T INI IGHV GKST
Sbjct: 38 SRQAT-INIGTIGHVAHGKST 57
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMG 193
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMG 193
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMG 193
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 20.2 bits (40), Expect = 8.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 246 SRSAFSLSNTQAYLKDPLPISWASFSN 166
+RS F L N +KD L ++ F+N
Sbjct: 78 TRSPFLLLNDPELIKDILIRDFSKFAN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,552
Number of Sequences: 438
Number of extensions: 1592
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8680350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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