Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31151
(767 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0 |Schizosacch... 291 7e-80
SPBC11G11.03 |||60S acidic ribosomal protein |Schizosaccharomyce... 58 2e-09
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 29 0.73
SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccha... 27 2.2
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 27 2.2
SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 27 3.0
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.0
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 26 5.2
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 5.2
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 6.8
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 6.8
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 25 9.0
SPBC428.17c |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.0
SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 25 9.0
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 9.0
>SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 312
Score = 291 bits (714), Expect = 7e-80
Identities = 135/250 (54%), Positives = 181/250 (72%)
Frame = +2
Query: 17 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 196
K+ YF K+ L ++Y F+V DNV SQQM +R LRG++ ++MGKNTM+R+A++ +
Sbjct: 8 KAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGII 67
Query: 197 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 376
++ P LE+LLP ++GNVGFVFT DL EVR+ ++ N + APARP AIAPL V +PA NTG
Sbjct: 68 NDMPELERLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNTG 127
Query: 377 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVV 556
+ P KTSFFQAL IPTKI++GTIEI +DVH++ KVG SEATLLNMLNISPF+YG+ V
Sbjct: 128 MEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNISPFTYGMDV 187
Query: 557 KQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 736
+YD G +F+PEILD+ EDL + + + A+SL YPTI S HS+ N +KNL+
Sbjct: 188 LTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLV 247
Query: 737 AIAAVTEVEF 766
A++ TE F
Sbjct: 248 AVSLATEYTF 257
>SPBC11G11.03 |||60S acidic ribosomal protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 241
Score = 57.6 bits (133), Expect = 2e-09
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Frame = +2
Query: 17 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 184
K+ F + Q LD + +I N+ + +++IR +GS I MGK +M KA+
Sbjct: 23 KAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKGSRI-FMGKTKVMAKALGHTP 81
Query: 185 -KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP-ARPGAIAPLSVVI 358
++H +N L KLL G VG +FT EV E+ VQ AR GA+AP + VI
Sbjct: 82 EEEHAENVSKLTKLL---HGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAVAPFTHVI 137
Query: 359 PA----HNTGLGPEKTSFF---------QALSIPTKISKGTIEIINDVHILKPGDKVGAS 499
PA G P + + L +PT + G + ++ D + G ++ +
Sbjct: 138 PAGPVYSRAGQIPVEDDILLTHTLEPQVRQLGMPTVLKNGVVTLLADFPLCTEGQQLDSR 197
Query: 500 EATLLNMLNI--SPFSYGLV 553
+ LL + I + F GL+
Sbjct: 198 QTRLLKLFGITAAEFKVGLL 217
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 147 CSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLAS 254
CS EKT C++ K+ T+ +PS CC ++T+ +
Sbjct: 264 CSTEKTSCCSQEKKSCCTSEKPS--CCSNGKSTVCA 297
>SPAC823.13c |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 27.5 bits (58), Expect = 2.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 213 RAGLLSRWSLMALRIIVFFPMSTILEPR 130
+A W LM + +++F + ILEPR
Sbjct: 162 QASTWGTWGLMGINVVLFVVVQLILEPR 189
>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -3
Query: 291 LSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRII 166
L +T +S + PTLP + + S +G+LSR + + ++ I
Sbjct: 35 LKQTVLQSSSFKSFPTLPRLAARNISNSGILSRTTPVIIKQI 76
>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 728
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 453 MISIVPFEILVGMERAWKKEVFSGPRPVLWAGMTTDNGAMAP 328
+IS P + L+G+ AW E S R + T+ +AP
Sbjct: 289 IISFTPAKYLIGIGAAWFSEKLSRERKSISVDKTSKRAILAP 330
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.0
Identities = 25/99 (25%), Positives = 43/99 (43%)
Frame = +3
Query: 84 PITWARNRCSRSVSRYVAPVSCSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLASCSP 263
P+T S SV PV+ S T+ + P +T T + NC TS + L + +P
Sbjct: 490 PLTTTNCTTSTSVPYTSTPVTSS-NYTISSSTPVTSTPVT---TTNCT-TSTSVLYTSTP 544
Query: 264 AETSLRSVTNCWRTKSRLQLVPVPLPHCQSSFPPTTPAS 380
++ + TNC T + + P+ + +TP +
Sbjct: 545 VTSTPLATTNC-TTSTSVPYTSTPVTSSNYTISSSTPVT 582
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 26.2 bits (55), Expect = 5.2
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -3
Query: 387 SGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPR---VNTKPTLPLMCGNSF 217
+G PV + + G++ P AGAW L N L T + +NT P PL G F
Sbjct: 138 NGGVPVYVPIIPPEEGSVKPVSAGAWKLDMNKLRNAITEKTKMIVINT-PHNPL--GKIF 194
Query: 216 SRAGL 202
S L
Sbjct: 195 SEEEL 199
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -3
Query: 306 LFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFFPMST 145
LFSN + R + R+ T L+ GN++ + W+L+A I F +T
Sbjct: 1512 LFSNCICRDNITLSRIGTNCMQQLLSGNAYRFE--VKDWNLVADMFIELFKETT 1563
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +3
Query: 291 NCWRTKSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKS 452
+ +R++ R L+ P +S PP TPA+ + + ++P+ R++L++
Sbjct: 79 SAFRSRYRGSLLNRNSPSLRSLSPPATPATPRSRIEGESQTSAIPQTDRLILEN 132
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 360 PPTTPASVQRKPLSSKLFPSLPKFQRVLLKSST 458
PPTT + + +P FQ++LLK ST
Sbjct: 309 PPTTRDPIYLGTMLRLFAEKIPVFQKILLKPST 341
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 25.4 bits (53), Expect = 9.0
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 65 KCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA 211
K IVGA NVGS + +S + IV++ N +KA + +D N A
Sbjct: 22 KIVIVGAGNVGSTTAFTLLLSGLAAEIVIIDLN--KKKAEGEAMDLNHA 68
>SPBC428.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 602
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 336 LPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLK 449
L HC + P A Q KPL S+ + SL KF+ LK
Sbjct: 532 LSHCFLNDPK---AFAQLKPLISQFYESLHKFKNFHLK 566
>SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 460 IVDDFNSTL*NFGRDGKSLEERGFLWTEAGVVGGNDD*QWG 338
IVD NS + R + L ++G L+ +GV GG + ++G
Sbjct: 101 IVDGGNSHYPDTTRRCEELAKKGILFVGSGVSGGEEGARYG 141
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +3
Query: 249 ASCSPAETSLRSVTNCWRTKSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPK 428
A + E + + R++ + + P + + PTT +R LS++ SL K
Sbjct: 131 AKKAKTEAPVEAANKSLRSRKKTPEIAAPA-NIEPEVAPTTKTPKKRAALSNEEKQSLKK 189
Query: 429 FQRVLL 446
FQ +L
Sbjct: 190 FQSAML 195
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,510,562
Number of Sequences: 5004
Number of extensions: 77476
Number of successful extensions: 243
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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