Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31146
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 194 4e-50
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 89 2e-18
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 58 9e-09
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 58 9e-09
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 43 3e-04
Z73976-1|CAA98289.1| 324|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 4.5
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 29 4.5
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 4.5
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 28 7.9
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 28 7.9
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 194 bits (474), Expect = 4e-50
Identities = 92/197 (46%), Positives = 129/197 (65%), Gaps = 4/197 (2%)
Frame = +1
Query: 157 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 336
Q+V+ ++ + +P YK +L+T+G Q+L+D++GK+YLD FGGIVTVSVGHCHPK+
Sbjct: 2 QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60
Query: 337 NAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKA 516
NAAL +Q LWHTT++Y IYEY E+L +K P LN V+ VNSGSEAN+LA LA+
Sbjct: 61 NAALTEQAQKLWHTTSIYHTEPIYEYAEKLLSKFPSKLNSVFFVNSGSEANDLALALARN 120
Query: 517 YTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYHAVHPDPFIXAFGG--CRD 690
YTG D+IS++ YHG T +++G T +++ P + +++ DP+ FGG CRD
Sbjct: 121 YTGRFDVISMRNGYHGMTQTVLGATNLGNWKPVFPHGFNIFKSLNADPYRGIFGGSNCRD 180
Query: 691 SISQAPG-SCSC-TGEC 735
S Q C C G C
Sbjct: 181 SPIQVKNRKCDCKPGSC 197
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 89.4 bits (212), Expect = 2e-18
Identities = 53/150 (35%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
Frame = +1
Query: 220 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRH 396
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL T N+ +
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVS 105
Query: 397 PKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSS 576
++ + EQ+ + LPG L+ V NSGSEAN+LA LA+ YT + D I ++ +YHG+ ++
Sbjct: 106 TQLTDCAEQILSTLPG-LDTVLFCNSGSEANDLALRLARDYTKHKDAIVIEHAYHGHVTT 164
Query: 577 LMGLTATQ-SYRMAIPVPPGFYHAVHPDPF 663
M L+ + + + P + A PD F
Sbjct: 165 TMELSPYKFDHGSTVSQPDWVHVAPCPDVF 194
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 77.0 bits (181), Expect = 1e-14
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +1
Query: 220 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRH 396
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL T N+ +
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVS 105
Query: 397 PKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYH 561
++ + EQ+ + LPG L+ V NSGSEAN+LA LA+ YT + D I ++ H
Sbjct: 106 TQLTDCAEQILSTLPG-LDTVLFCNSGSEANDLALRLARDYTKHKDAIVIEQLVH 159
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 57.6 bits (133), Expect = 9e-09
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = +1
Query: 220 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 399
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 400 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 519
+ EY E+ KL + V +N+G EA E A LA+ +
Sbjct: 100 VLGEY-EEYVTKL-FKYDKVLPMNTGVEACESAVKLARRW 137
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 57.6 bits (133), Expect = 9e-09
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = +1
Query: 220 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 399
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 400 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 519
+ EY E+ KL + V +N+G EA E A LA+ +
Sbjct: 100 VLGEY-EEYVTKL-FKYDKVLPMNTGVEACESAVKLARRW 137
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1
Query: 220 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 384
PV L++G +++D +GK+Y D V+ GHCHPK+ LKD V+ N
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91
>Z73976-1|CAA98289.1| 324|Caenorhabditis elegans Hypothetical
protein T07C12.1 protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -3
Query: 170 CSTCWYEGPVYGLGTKSVGGILAVLYVLTMSKHNFVPLLAISMCLSVEAIAICH 9
C CWY P++ + ++G L L V+ ++ F LAI +CL V I H
Sbjct: 261 CVLCWYS-PIFNI---NLGRGLNYLEVIALAAFPFCDPLAIILCLPVLRNRILH 310
>Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical
protein T26F2.3 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Frame = +1
Query: 241 HMQWLYDNDGKRYLDLF-GGIVTVSVGH-----C---HPKVNAALKDQLDVLWHTTNLYR 393
H +WL+ N K Y F G + T+ +G C K+ + ++DV W N
Sbjct: 205 HGKWLHWNSQKHYFQSFLGNVPTILIGRKDQNDCVYQVDKIKTSEIPKMDVKWKVQNCL- 263
Query: 394 HPKIYEYVEQLAAKLPGD 447
+++ + ++ +KLP D
Sbjct: 264 -AQLFTVLNKIMSKLPDD 280
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +1
Query: 481 EANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYH 642
EAN ATL + A T N I + +Y Y SL YR +PV F H
Sbjct: 508 EANRNATLYSYALTENFLIFTTSNNYIVY-FSLSEWAIVSEYRHVVPVRSIFPH 560
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +1
Query: 481 EANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYH 642
EAN ATL + A T N I + +Y Y SL YR +PV F H
Sbjct: 508 EANRNATLYSYALTENFLIFTTSNNYIVY-FSLSEWAIVSEYRHVVPVRSIFPH 560
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 106 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 222
K+ P + P+ G YQQ++Q PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +1
Query: 481 EANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYH 642
EAN ATL + A T N I + +Y Y SL YR +PV F H
Sbjct: 508 EANRNATLYSYALTENFLIFTTSNNYIVY-FSLSEWAIVSEYRHVVPVRSIFPH 560
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 421 QLAAKLPGDLNVV--YLVNSGSEAN-ELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLT 591
Q A +L +N + +L+N+ ++ N + L A+ + +I S + GY + L LT
Sbjct: 102 QQAVQLDQQINELNTFLINAQADTNPNNSPLFAQLTAFSNNITSQNATLQGYITKLNALT 161
Query: 592 ATQS 603
ATQ+
Sbjct: 162 ATQA 165
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 421 QLAAKLPGDLNVV--YLVNSGSEAN-ELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLT 591
Q A +L +N + +L+N+ ++ N + L A+ + +I S + GY + L LT
Sbjct: 105 QQAVQLDQQINELNTFLINAQADTNPNNSPLFAQLTAFSNNITSQNATLQGYITKLNALT 164
Query: 592 ATQS 603
ATQ+
Sbjct: 165 ATQA 168
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 180 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 52
SFH L R+R R R R + RSDDV A S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,245,646
Number of Sequences: 27780
Number of extensions: 420218
Number of successful extensions: 1267
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -