Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31145
(414 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 107 3e-24
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 49 1e-06
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 49 1e-06
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 43 1e-04
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 29 1.8
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 27 4.1
CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical ... 27 4.1
Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical pr... 26 9.4
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 107 bits (257), Expect = 3e-24
Identities = 46/86 (53%), Positives = 64/86 (74%)
Frame = +1
Query: 154 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 333
Q+V+ ++ + +P YK +L+T+G Q+L+D++GK+YLD FGGIVTVSVGHCHPK+
Sbjct: 2 QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60
Query: 334 NAALKDQLDVLWHTTNLYRHPKIYEY 411
NAAL +Q LWHTT++Y IYEY
Sbjct: 61 NAALTEQAQKLWHTTSIYHTEPIYEY 86
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +1
Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 396
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 397 KIYEY 411
+ EY
Sbjct: 100 VLGEY 104
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +1
Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 396
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 397 KIYEY 411
+ EY
Sbjct: 100 VLGEY 104
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 44.4 bits (100), Expect = 3e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 357
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQL 94
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 44.4 bits (100), Expect = 3e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 357
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQL 94
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1
Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 381
PV L++G +++D +GK+Y D V+ GHCHPK+ LKD V+ N
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 103 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 219
K+ P + P+ G YQQ++Q PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 177 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 49
SFH L R+R R R R + RSDDV A S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 26 QQRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK 160
++R S+ ++ + ++S R R K RRR DR+RD R K
Sbjct: 460 RERRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSRDERNEK 504
>CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical
protein C42C1.1 protein.
Length = 347
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 155 WYEGPVYGLGTKSVGGILAV-LYVLTMSKHNFVPLLAIS 42
W+ G + G+G + GG+LA L ++ S ++ V LL +S
Sbjct: 135 WWIGIIIGIGLYTAGGLLAYSLAIVATSFYHTVFLLVLS 173
>Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical
protein K09A11.5 protein.
Length = 650
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 315 PLSSESKCSPQRSTRCIVAYDQP 383
PL + CS ST C++AY P
Sbjct: 564 PLQNFGVCSNWASTHCMIAYQNP 586
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,111,559
Number of Sequences: 27780
Number of extensions: 255473
Number of successful extensions: 815
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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