Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31143
         (390 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...    97   4e-21
U41534-14|AAV34796.1|  226|Caenorhabditis elegans Hypothetical p...    46   9e-06
U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical p...    46   9e-06
U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical pr...    44   3e-05
U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical pr...    44   3e-05
U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical p...    43   9e-05
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen...    27   3.6  
Z50742-5|CAA90618.2|  650|Caenorhabditis elegans Hypothetical pr...    26   8.2  

>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score = 97.1 bits (231), Expect = 4e-21
 Identities = 41/77 (53%), Positives = 59/77 (76%)
 Frame = +3

Query: 159 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 338
           Q+V+ ++ + +P      YK  +L+T+G  Q+L+D++GK+YLD FGGIVTVSVGHCHPK+
Sbjct: 2   QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60

Query: 339 NAALKDQLDVLWHTTNL 389
           NAAL +Q   LWHTT++
Sbjct: 61  NAALTEQAQKLWHTTSI 77


>U41534-14|AAV34796.1|  226|Caenorhabditis elegans Hypothetical
           protein C16A3.10c protein.
          Length = 226

 Score = 46.0 bits (104), Expect = 9e-06
 Identities = 19/54 (35%), Positives = 32/54 (59%)
 Frame = +3

Query: 222 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTT 383
           PV L++G   +++D +GK+Y D       V+ GHCHPK+   +++Q   L  T+
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTS 93


>U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical
           protein C16A3.10a protein.
          Length = 422

 Score = 46.0 bits (104), Expect = 9e-06
 Identities = 19/54 (35%), Positives = 32/54 (59%)
 Frame = +3

Query: 222 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTT 383
           PV L++G   +++D +GK+Y D       V+ GHCHPK+   +++Q   L  T+
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTS 93


>U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical
           protein T01B11.2b protein.
          Length = 160

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +3

Query: 222 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 362
           P ++++  MQ+LYD    ++LD    +    VGHCHPKV  A+  QL
Sbjct: 50  PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQL 94


>U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical
           protein T01B11.2a protein.
          Length = 467

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +3

Query: 222 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 362
           P ++++  MQ+LYD    ++LD    +    VGHCHPKV  A+  QL
Sbjct: 50  PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQL 94


>U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical
           protein C16A3.10b protein.
          Length = 357

 Score = 42.7 bits (96), Expect = 9e-05
 Identities = 21/55 (38%), Positives = 31/55 (56%)
 Frame = +3

Query: 222 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 386
           PV L++G   +++D +GK+Y D       V+ GHCHPK+   LKD   V+    N
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91


>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
           on autosome protein2 protein.
          Length = 1758

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
 Frame = +3

Query: 81  HRQNVQH-GQNAADGFRAQYRTRVPSYQQVEQMKGVYMPPSITNAYKK 221
           H QN QH    +   F    R   P Y Q     G  +PP  T  Y++
Sbjct: 96  HHQNQQHQASTSTQQFHHPQRPPPPQYDQPSSSTGSSLPPLHTVRYEQ 143


>Z50742-5|CAA90618.2|  650|Caenorhabditis elegans Hypothetical
           protein K09A11.5 protein.
          Length = 650

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 320 PLSSESKCSPQRSTRCIVAYDQP 388
           PL +   CS   ST C++AY  P
Sbjct: 564 PLQNFGVCSNWASTHCMIAYQNP 586


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,454,862
Number of Sequences: 27780
Number of extensions: 233628
Number of successful extensions: 751
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)