Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31137
         (497 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY308063-1|AAQ75554.1|  290|Caenorhabditis elegans EXC-4 protein.      60   7e-10
AL132876-18|CAD21669.2|  290|Caenorhabditis elegans Hypothetical...    60   7e-10
AF099925-13|AAC69503.2|  287|Caenorhabditis elegans Hypothetical...    31   0.61 
AC024209-2|AAF36056.1|  180|Caenorhabditis elegans Hypothetical ...    30   1.1  
AC024209-1|AAF36058.1|  180|Caenorhabditis elegans Hypothetical ...    30   1.1  
Z81540-9|CAD89742.1|  740|Caenorhabditis elegans Hypothetical pr...    28   4.3  

>AY308063-1|AAQ75554.1|  290|Caenorhabditis elegans EXC-4 protein.
          Length = 290

 Score = 60.5 bits (140), Expect = 7e-10
 Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
 Frame = +3

Query: 111 ANGDX---PEIELIIXASTIDGRXKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQXPP 281
           +NGD    P +EL + AS ID R  GA LFCQE++M+LY L E+    ++V TV++    
Sbjct: 9   SNGDPQSKPLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNVNSEA 68

Query: 282 PDXRTNFEATHPPILI--DNGLAILENEKIERHI 377
              + NF    PPI+I  +  L   +N +IE  I
Sbjct: 69  --FKKNFLGAQPPIMIEEEKELTYTDNREIEGRI 100


>AL132876-18|CAD21669.2|  290|Caenorhabditis elegans Hypothetical
           protein Y105E8A.22 protein.
          Length = 290

 Score = 60.5 bits (140), Expect = 7e-10
 Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
 Frame = +3

Query: 111 ANGDX---PEIELIIXASTIDGRXKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQXPP 281
           +NGD    P +EL + AS ID R  GA LFCQE++M+LY L E+    ++V TV++    
Sbjct: 9   SNGDPQSKPLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNVNSEA 68

Query: 282 PDXRTNFEATHPPILI--DNGLAILENEKIERHI 377
              + NF    PPI+I  +  L   +N +IE  I
Sbjct: 69  --FKKNFLGAQPPIMIEEEKELTYTDNREIEGRI 100


>AF099925-13|AAC69503.2|  287|Caenorhabditis elegans Hypothetical
           protein K01A2.1 protein.
          Length = 287

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
 Frame = +3

Query: 279 PPDXRTNFEATHPPILIDNGLAILENEKIERHIMKSVP------GGHNLILAG-QRGRVS 437
           P D RT F A HP + ID  +  L  E+I  + ++S         G N++L G ++ R+ 
Sbjct: 147 PKDGRTLFSARHPTVTIDKRIKKLAAERIITNKIRSAVDETLKINGENVVLRGNEQVRID 206

Query: 438 NREPVFK 458
            R   F+
Sbjct: 207 ARNVNFE 213


>AC024209-2|AAF36056.1|  180|Caenorhabditis elegans Hypothetical
           protein Y75D11A.3 protein.
          Length = 180

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +3

Query: 402 NLILAGQRGRVSNREPVFKT 461
           NL++A ++GRV  R+P+FKT
Sbjct: 22  NLMVAAEKGRVLQRDPMFKT 41


>AC024209-1|AAF36058.1|  180|Caenorhabditis elegans Hypothetical
           protein Y75D11A.2 protein.
          Length = 180

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +3

Query: 402 NLILAGQRGRVSNREPVFKT 461
           NL++A ++GRV  R+P+FKT
Sbjct: 22  NLMVAAEKGRVLQRDPMFKT 41


>Z81540-9|CAD89742.1|  740|Caenorhabditis elegans Hypothetical
           protein F46B3.17 protein.
          Length = 740

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 463 SVLNTGSRLETRPLCPARMRLCPPG 389
           +++N+G RL   P+CP     CP G
Sbjct: 190 TLMNSGERLGPLPICPLDENRCPMG 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,223,694
Number of Sequences: 27780
Number of extensions: 215476
Number of successful extensions: 494
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)