Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31132
         (320 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0269 - 26818182-26820266                                         26   7.6  
04_04_1020 + 30179214-30179285,30179597-30179671,30179839-301799...    26   7.6  

>05_06_0269 - 26818182-26820266
          Length = 694

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +2

Query: 2   LYTKNSIFYNIYWS--KYNIFSTTFFRFSWNTSTIFRLSRTHIFHE 133
           LYTK S+  + +W+  K N   +T+   +   +    +S   +FH+
Sbjct: 287 LYTKKSMLLSYFWAKDKRNALISTYSHLNRLLAVCLTISAVALFHQ 332


>04_04_1020 +
           30179214-30179285,30179597-30179671,30179839-30179947,
           30180425-30180642,30180729-30181309,30181387-30182185
          Length = 617

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 100 YRRGIPAKPKKCCGKNVIFTPINIV 26
           Y R +    ++C G+ V FTP+ ++
Sbjct: 447 YNRAVMPAARRCLGRAVAFTPLQLM 471


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,226,309
Number of Sequences: 37544
Number of extensions: 79166
Number of successful extensions: 146
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)