Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31116
         (788 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M98776-1|AAB47721.1|  644|Homo sapiens keratin 1 protein.              34   0.67 
BC063697-1|AAH63697.1|  644|Homo sapiens keratin 1 (epidermolyti...    34   0.67 
AF304164-1|AAG41947.1|  644|Homo sapiens keratin 1 protein.            34   0.67 
AF237621-1|AAF60327.1|  644|Homo sapiens keratin 1 protein.            34   0.67 
BC015325-1|AAH15325.1|  222|Homo sapiens ZH2C2 protein protein.        32   2.7  
AK000132-1|BAA90963.1|  392|Homo sapiens protein ( Homo sapiens ...    32   2.7  
AJ508777-1|CAD48514.1|  529|Homo sapiens keratin 6 irs4 protein.       31   6.3  

>M98776-1|AAB47721.1|  644|Homo sapiens keratin 1 protein.
          Length = 644

 Score = 33.9 bits (74), Expect = 0.67
 Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +2

Query: 359 RKMDEQFQLLFEKMK-IEMQNQAVSISNTIMDRIDXXXXXXXXXXXXXIFKVENLEKKIE 535
           + ++ QF    +K++ +E QNQ +     ++ ++D              F + NL ++++
Sbjct: 185 KSLNNQFASFIDKVRFLEQQNQVLQTKWELLQQVDTSTRTHNLEPYFESF-INNLRRRVD 243

Query: 536 FLERDKKGNNIIIYGLKEGEKSTRELIENAKNKFQKELN 652
            L+ D+         L    K+ ++++E+ +NK++ E+N
Sbjct: 244 QLKSDQSR-------LDSELKNMQDMVEDYRNKYEDEIN 275


>BC063697-1|AAH63697.1|  644|Homo sapiens keratin 1 (epidermolytic
           hyperkeratosis) protein.
          Length = 644

 Score = 33.9 bits (74), Expect = 0.67
 Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +2

Query: 359 RKMDEQFQLLFEKMK-IEMQNQAVSISNTIMDRIDXXXXXXXXXXXXXIFKVENLEKKIE 535
           + ++ QF    +K++ +E QNQ +     ++ ++D              F + NL ++++
Sbjct: 185 KSLNNQFASFIDKVRFLEQQNQVLQTKWELLQQVDTSTRTHNLEPYFESF-INNLRRRVD 243

Query: 536 FLERDKKGNNIIIYGLKEGEKSTRELIENAKNKFQKELN 652
            L+ D+         L    K+ ++++E+ +NK++ E+N
Sbjct: 244 QLKSDQSR-------LDSELKNMQDMVEDYRNKYEDEIN 275


>AF304164-1|AAG41947.1|  644|Homo sapiens keratin 1 protein.
          Length = 644

 Score = 33.9 bits (74), Expect = 0.67
 Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +2

Query: 359 RKMDEQFQLLFEKMK-IEMQNQAVSISNTIMDRIDXXXXXXXXXXXXXIFKVENLEKKIE 535
           + ++ QF    +K++ +E QNQ +     ++ ++D              F + NL ++++
Sbjct: 185 KSLNNQFASFIDKVRFLEQQNQVLQTKWELLQQVDTSTRTHNLEPYFESF-INNLRRRVD 243

Query: 536 FLERDKKGNNIIIYGLKEGEKSTRELIENAKNKFQKELN 652
            L+ D+         L    K+ ++++E+ +NK++ E+N
Sbjct: 244 QLKSDQSR-------LDSELKNMQDMVEDYRNKYEDEIN 275


>AF237621-1|AAF60327.1|  644|Homo sapiens keratin 1 protein.
          Length = 644

 Score = 33.9 bits (74), Expect = 0.67
 Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +2

Query: 359 RKMDEQFQLLFEKMK-IEMQNQAVSISNTIMDRIDXXXXXXXXXXXXXIFKVENLEKKIE 535
           + ++ QF    +K++ +E QNQ +     ++ ++D              F + NL ++++
Sbjct: 185 KSLNNQFASFIDKVRFLEQQNQVLQTKWELLQQVDTSTRTHNLEPYFESF-INNLRRRVD 243

Query: 536 FLERDKKGNNIIIYGLKEGEKSTRELIENAKNKFQKELN 652
            L+ D+         L    K+ ++++E+ +NK++ E+N
Sbjct: 244 QLKSDQSR-------LDSELKNMQDMVEDYRNKYEDEIN 275


>BC015325-1|AAH15325.1|  222|Homo sapiens ZH2C2 protein protein.
          Length = 222

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +2

Query: 521 EKKIEFLERDKKGNNIIIYGLKEGEKSTRELIEN---AKNKFQKELNLVLEDY 670
           EKK+ ++ +D+K N ++I   +E +K  RE  EN   A +   + L LV  +Y
Sbjct: 47  EKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDSGAHHGISRTLTLVESNY 99


>AK000132-1|BAA90963.1|  392|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20125 fis, clone COL06152. ).
          Length = 392

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +2

Query: 521 EKKIEFLERDKKGNNIIIYGLKEGEKSTRELIEN---AKNKFQKELNLVLEDY 670
           EKK+ ++ +D+K N ++I   +E +K  RE  EN   A +   + L LV  +Y
Sbjct: 47  EKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDSGAHHGISRTLTLVESNY 99


>AJ508777-1|CAD48514.1|  529|Homo sapiens keratin 6 irs4 protein.
          Length = 529

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
 Frame = +2

Query: 365 MDEQFQLLFEKMK-IEMQNQAVSISNTIMDRIDXXXXXXXXXXXXXIFKVENLEKKIEFL 541
           ++++F    +K++ +E QNQ +     ++ ++D              + + NL K++E L
Sbjct: 147 LNDKFASFIDKVRFLEQQNQVLETKWELLQQLDLNNCKKNLEPILEGY-ISNLRKQLETL 205

Query: 542 ERDKKGNNIIIYGLKEGEKSTRELIENAKNKFQKELN 652
             D+         L    +S R+L+E+ K +++ E+N
Sbjct: 206 SGDR-------VRLDSELRSMRDLVEDYKKRYEVEIN 235


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,648,142
Number of Sequences: 237096
Number of extensions: 1749110
Number of successful extensions: 7131
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7131
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)