Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31108
         (400 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   3.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.2  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   6.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   6.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   6.9  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 11  SEVSIHLSYISCPVRSLTYIH 73
           S ++I + YISCP  S+ + H
Sbjct: 180 SILAIKVYYISCPEISVNFAH 200


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 299 NELXERTCRRMSYAYVSRCYGXRS 228
           N L E+T  R  YA+V    G RS
Sbjct: 464 NFLPEKTANRHYYAFVPFSAGPRS 487


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 271  RRHVRSXSSFLISE*NNQTXECTCSFSRL 357
            R H ++ SSF  S+ +N+  E  C   +L
Sbjct: 1865 RNHDQNNSSFNDSKESNEISEAECDRDQL 1893


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 233 GRRNTVRHMRNSCD 274
           G  NT  H R SCD
Sbjct: 77  GLTNTASHTRLSCD 90


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 233 GRRNTVRHMRNSCD 274
           G  NT  H R SCD
Sbjct: 82  GLTNTASHTRLSCD 95


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 233 GRRNTVRHMRNSCD 274
           G  NT  H R SCD
Sbjct: 82  GLTNTASHTRLSCD 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,038
Number of Sequences: 438
Number of extensions: 1654
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)