Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31107
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 241 9e-65
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 241 9e-65
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 241 9e-65
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 241 9e-65
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 146 5e-36
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 146 5e-36
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 1e-33
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 131 1e-31
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 69 1e-12
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 69 1e-12
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 69 1e-12
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 66 8e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 66 8e-12
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 55 2e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 52 1e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 1e-06
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 42 2e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 41 3e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 37 0.006
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 37 0.006
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 31 0.021
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.28
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.28
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 0.49
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 0.49
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 0.86
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 0.86
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 27 4.6
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 27 4.6
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 27 6.1
U28412-7|AAC46597.2| 201|Caenorhabditis elegans Hypothetical pr... 27 6.1
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 27 6.1
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical pr... 26 8.1
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 26 8.1
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 26 8.1
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 241 bits (591), Expect = 9e-65
Identities = 111/114 (97%), Positives = 113/114 (99%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVL 114
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 241 bits (591), Expect = 9e-65
Identities = 111/114 (97%), Positives = 113/114 (99%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVL 114
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 241 bits (591), Expect = 9e-65
Identities = 111/114 (97%), Positives = 113/114 (99%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVL 114
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 241 bits (591), Expect = 9e-65
Identities = 111/114 (97%), Positives = 113/114 (99%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVL 114
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 146 bits (354), Expect = 5e-36
Identities = 65/111 (58%), Positives = 84/111 (75%)
Frame = +1
Query: 52 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 232 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAIL 277
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 146 bits (354), Expect = 5e-36
Identities = 65/111 (58%), Positives = 84/111 (75%)
Frame = +1
Query: 52 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 232 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAIL 295
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 1e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAER 243
DKLK +
Sbjct: 61 DKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 131 bits (317), Expect = 1e-31
Identities = 58/113 (51%), Positives = 81/113 (71%)
Frame = +1
Query: 46 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 225
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 226 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVL 216
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 68.9 bits (161), Expect = 1e-12
Identities = 40/112 (35%), Positives = 58/112 (51%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 228
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 229 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAIL 141
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 68.9 bits (161), Expect = 1e-12
Identities = 40/112 (35%), Positives = 58/112 (51%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 228
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 229 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAIL 142
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 68.9 bits (161), Expect = 1e-12
Identities = 40/112 (35%), Positives = 58/112 (51%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 228
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 229 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAIL 142
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 66.1 bits (154), Expect = 8e-12
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 228
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 229 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVL 137
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 66.1 bits (154), Expect = 8e-12
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 228
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 229 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVL 137
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 55.2 bits (127), Expect = 2e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 247 RGITIDIALWKFETSKYYVTIIDAPGHRDF 336
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 52.4 bits (120), Expect = 1e-07
Identities = 36/106 (33%), Positives = 49/106 (46%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 247 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
RGITI A + + IID PGH DF + D AVL
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVL 141
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.8 bits (111), Expect = 1e-06
Identities = 31/90 (34%), Positives = 42/90 (46%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 247 RGITIDIALWKFETSKYYVTIIDAPGHRDF 336
RGIT+ Y + +ID PGH DF
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDF 115
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 41.5 bits (93), Expect = 2e-04
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 13/127 (10%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 195
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 196 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 363
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 364 QADCAVL 384
D A++
Sbjct: 133 VTDGALV 139
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 41.1 bits (92), Expect = 3e-04
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 13/127 (10%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 195
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 196 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 363
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 364 QADCAVL 384
D A++
Sbjct: 133 VTDGALV 139
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 36.7 bits (81), Expect = 0.006
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +1
Query: 49 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 225
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 226 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALL 112
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 36.7 bits (81), Expect = 0.006
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +1
Query: 49 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 225
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 226 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALL 112
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 30.7 bits (66), Expect(2) = 0.021
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 190 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 366
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 367 ADCAVL 384
AD VL
Sbjct: 228 ADIVVL 233
Score = 23.0 bits (47), Expect(2) = 0.021
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 70 IVVIGHVDSGKST 108
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.28
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 19 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 129
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.28
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 19 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 129
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.3 bits (65), Expect = 0.49
Identities = 25/106 (23%), Positives = 43/106 (40%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 247 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
+ + I + Y + IID PGH +F M AD V+
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVV 230
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.3 bits (65), Expect = 0.49
Identities = 25/106 (23%), Positives = 43/106 (40%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 247 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 384
+ + I + Y + IID PGH +F M AD V+
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVV 105
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 0.86
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.86
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 64 INIVVIGHVDSGKSTTT 114
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 64 INIVVIGHVDSGKSTTT 114
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +1
Query: 301 VTIIDAPGHRDFI--KNMITGTSQA 369
V IID+ G RDFI KN+ GT+ A
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGTADA 97
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 307 IIDAPGHRDFIKNMITGTSQADCAVL 384
IID PGH F G+S D A+L
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAIL 578
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 26.6 bits (56), Expect = 6.1
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Frame = +1
Query: 16 QFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEM 189
+ ++R P+ ++ + + V+G D GKST G L C G K I F + E+
Sbjct: 154 EVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEV 211
Query: 190 GKGSFKYAWVLDKLKAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 357
G K + V + + RG ++ A E S VT+ID G + K I G
Sbjct: 212 RTG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269
>U28412-7|AAC46597.2| 201|Caenorhabditis elegans Hypothetical
protein T19C3.6 protein.
Length = 201
Score = 26.6 bits (56), Expect = 6.1
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +1
Query: 10 YTQFVIRD*PKMGKEKTHINIVVIGHVDSGKST--TTGHLIYKCGGIDKRTIEKFEKEAQ 183
Y +F ++D K + + ++ K T + H I +C +R + + K Q
Sbjct: 57 YARFAMKDTMKSIFAECKAMKTCLARIEREKQTEASMNHKIRQCYITLRRLCQLYYKFYQ 116
Query: 184 EMGKGSF-KYAWVLDKLKAERERGITIDIALWKFE 285
++ K ++AW + +K + + +D A++KF+
Sbjct: 117 DLEKLKIPEHAWNVPLVKKAEKSIVVLDHAIYKFK 151
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 298 YVTIIDAPGHRDFIKNMITGTSQADCAVL 384
+V+ +D PGH + M+ G + D A L
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFL 156
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 26.2 bits (55), Expect = 8.1
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 37 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 195
PK +EK I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 26.2 bits (55), Expect = 8.1
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 37 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 195
PK +EK I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical
protein F25D1.1b protein.
Length = 367
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 366 LRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI 262
LR CD VLDE V S ++ +V+ F PE NI
Sbjct: 253 LREVCDDVLDECLVKGSRDNMTMVVVCFPAAPEVNI 288
>Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical
protein F25D1.1a protein.
Length = 468
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 366 LRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI 262
LR CD VLDE V S ++ +V+ F PE NI
Sbjct: 354 LREVCDDVLDECLVKGSRDNMTMVVVCFPAAPEVNI 389
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 26.2 bits (55), Expect = 8.1
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 26.2 bits (55), Expect = 8.1
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 37 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 195
PK +EK I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,487,452
Number of Sequences: 27780
Number of extensions: 161043
Number of successful extensions: 507
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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