Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31096
         (486 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   205   1e-53
Z92829-5|CAB07345.1|  324|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    27   9.5  
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  205 bits (501), Expect = 1e-53
 Identities = 97/119 (81%), Positives = 105/119 (88%)
 Frame = +3

Query: 129 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 308
           E+ LFG+WS   V VSD+SL DYI VKEK AKYLPHSAGR+  +RFRKA CPIVERL NS
Sbjct: 22  EVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHSAGRFQVRRFRKAACPIVERLANS 81

Query: 309 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 485
           LMMHGRNNGKKLM VRIVKHAFEII+LLTGENP+QVLV A+INSGPREDSTRIGRAGTV
Sbjct: 82  LMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTV 140


>Z92829-5|CAB07345.1|  324|Caenorhabditis elegans Hypothetical
           protein F10A3.5 protein.
          Length = 324

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 182 HIRDLHIVATPSAEKLDFQECRRLVVKTWFP 90
           H+  L +VA+ +  +L  Q  R LVV+T FP
Sbjct: 230 HLNKLEVVASVNFRELQNQLFRTLVVQTIFP 260


>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
            F57F4.4 protein.
          Length = 2090

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 21/63 (33%), Positives = 27/63 (42%)
 Frame = -1

Query: 297  GAPRLGTGLYGNACVHTCQLNEVNILRTSL*RKCSPAETYQRLAHRSNSICRKA*FPGMS 118
            GAP    G YG+    T      N   T+    C P    Q+L + SNS C+    PG+S
Sbjct: 1793 GAPLTLQGCYGDCASITISTTIQNQNHTATLLTCDPTTVCQQL-NMSNS-CQTV-EPGVS 1849

Query: 117  AAC 109
              C
Sbjct: 1850 GCC 1852


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
            interacting proteinprotein 1 protein.
          Length = 2153

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 21/63 (33%), Positives = 27/63 (42%)
 Frame = -1

Query: 297  GAPRLGTGLYGNACVHTCQLNEVNILRTSL*RKCSPAETYQRLAHRSNSICRKA*FPGMS 118
            GAP    G YG+    T      N   T+    C P    Q+L + SNS C+    PG+S
Sbjct: 1793 GAPLTLQGCYGDCASITISTTIQNQNHTATLLTCDPTTVCQQL-NMSNS-CQTV-EPGVS 1849

Query: 117  AAC 109
              C
Sbjct: 1850 GCC 1852


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
           protein F45E4.4 protein.
          Length = 2361

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 449 TGSRVDNGSHEYLQRVFSS*QVNNFKRMFD 360
           TGSR  +GS  + Q  FS+  ++ FK  FD
Sbjct: 226 TGSRHSSGSSAHSQFGFSTPSISGFKIFFD 255


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,616,334
Number of Sequences: 27780
Number of extensions: 239298
Number of successful extensions: 576
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)