Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31090
         (319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   2.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   8.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   8.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   8.3  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 315 VLSSHHQLNDIKIYHQQNIQLM 250
           +  SHH L+  ++ +QQ+  LM
Sbjct: 69  IYQSHHHLHHHQVLYQQSPYLM 90


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 103 EYRRGIPAKPKKCCGKNVIFTPIN 32
           ++  GIP   K     +VIF  IN
Sbjct: 134 QFGSGIPMGAKYLMDSDVIFVTIN 157


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
          protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 11 KNSIFYNIY 37
          KN+IFY +Y
Sbjct: 26 KNAIFYQVY 34


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 103 EYRRGIPAKPKKCCGKNVIFTPIN 32
           ++  GIP   K     +VIF  IN
Sbjct: 134 QFGSGIPMGAKYLMDSDVIFVTIN 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,638
Number of Sequences: 438
Number of extensions: 1320
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)