BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31085
(571 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33317-1|AAC50382.1| 101|Homo sapiens defensin 6 protein. 29 8.7
M98331-1|AAB59357.1| 100|Homo sapiens defensin 6 protein. 29 8.7
BC093953-1|AAH93953.1| 100|Homo sapiens defensin, alpha 6, prep... 29 8.7
BC093951-1|AAH93951.1| 100|Homo sapiens defensin, alpha 6, Pane... 29 8.7
BC069769-1|AAH69769.1| 100|Homo sapiens defensin, alpha 6, Pane... 29 8.7
BC069728-1|AAH69728.1| 100|Homo sapiens defensin, alpha 6, Pane... 29 8.7
BC069710-1|AAH69710.1| 100|Homo sapiens defensin, alpha 6, Pane... 29 8.7
BC069667-1|AAH69667.1| 100|Homo sapiens defensin, alpha 6, Pane... 29 8.7
AF200455-1|AAT68876.1| 100|Homo sapiens defensin, alpha 6, Pane... 29 8.7
>U33317-1|AAC50382.1| 101|Homo sapiens defensin 6 protein.
Length = 101
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 497 FTAHCRKSPCHNKYMYCMCNR*PFTSNHRLYCL 399
FT HCR+S +Y Y C NHR CL
Sbjct: 71 FTCHCRRSCYSTEYSYGTCT--VMGINHRFCCL 101
>M98331-1|AAB59357.1| 100|Homo sapiens defensin 6 protein.
Length = 100
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 497 FTAHCRKSPCHNKYMYCMCNR*PFTSNHRLYCL 399
FT HCR+S +Y Y C NHR CL
Sbjct: 70 FTCHCRRSCYSTEYSYGTCT--VMGINHRFCCL 100
>BC093953-1|AAH93953.1| 100|Homo sapiens defensin, alpha 6,
preproprotein protein.
Length = 100
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 497 FTAHCRKSPCHNKYMYCMCNR*PFTSNHRLYCL 399
FT HCR+S +Y Y C NHR CL
Sbjct: 70 FTCHCRRSCYSTEYSYGTCT--VMGINHRFCCL 100
>BC093951-1|AAH93951.1| 100|Homo sapiens defensin, alpha 6, Paneth
cell-specific protein.
Length = 100
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 497 FTAHCRKSPCHNKYMYCMCNR*PFTSNHRLYCL 399
FT HCR+S +Y Y C NHR CL
Sbjct: 70 FTCHCRRSCYSTEYSYGTCT--VMGINHRFCCL 100
>BC069769-1|AAH69769.1| 100|Homo sapiens defensin, alpha 6, Paneth
cell-specific protein.
Length = 100
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 497 FTAHCRKSPCHNKYMYCMCNR*PFTSNHRLYCL 399
FT HCR+S +Y Y C NHR CL
Sbjct: 70 FTCHCRRSCYSTEYSYGTCT--VMGINHRFCCL 100
>BC069728-1|AAH69728.1| 100|Homo sapiens defensin, alpha 6, Paneth
cell-specific protein.
Length = 100
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 497 FTAHCRKSPCHNKYMYCMCNR*PFTSNHRLYCL 399
FT HCR+S +Y Y C NHR CL
Sbjct: 70 FTCHCRRSCYSTEYSYGTCT--VMGINHRFCCL 100
>BC069710-1|AAH69710.1| 100|Homo sapiens defensin, alpha 6, Paneth
cell-specific protein.
Length = 100
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 497 FTAHCRKSPCHNKYMYCMCNR*PFTSNHRLYCL 399
FT HCR+S +Y Y C NHR CL
Sbjct: 70 FTCHCRRSCYSTEYSYGTCT--VMGINHRFCCL 100
>BC069667-1|AAH69667.1| 100|Homo sapiens defensin, alpha 6, Paneth
cell-specific protein.
Length = 100
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 497 FTAHCRKSPCHNKYMYCMCNR*PFTSNHRLYCL 399
FT HCR+S +Y Y C NHR CL
Sbjct: 70 FTCHCRRSCYSTEYSYGTCT--VMGINHRFCCL 100
>AF200455-1|AAT68876.1| 100|Homo sapiens defensin, alpha 6, Paneth
cell-specific protein.
Length = 100
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 497 FTAHCRKSPCHNKYMYCMCNR*PFTSNHRLYCL 399
FT HCR+S +Y Y C NHR CL
Sbjct: 70 FTCHCRRSCYSTEYSYGTCT--VMGINHRFCCL 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,687,008
Number of Sequences: 237096
Number of extensions: 1570351
Number of successful extensions: 2593
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2592
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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