Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31085
         (571 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001327-1|AAN71082.1|  162|Drosophila melanogaster AT17081p pro...    29   3.3  
AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-P...    29   4.4  
AF254867-1|AAF77184.1| 1482|Drosophila melanogaster SNS protein.       28   7.7  
AE013599-717|AAF59040.2| 1479|Drosophila melanogaster CG33141-PA...    28   7.7  
AE013599-716|ABI31083.1| 1542|Drosophila melanogaster CG33141-PB...    28   7.7  

>BT001327-1|AAN71082.1|  162|Drosophila melanogaster AT17081p
           protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -2

Query: 405 LSIVCTRKDKLHDRIIRFNNDCLSLWIDPMAKRSRWRSLTRWEEDLSWPNLDRRNTGYRR 226
           +S+  T++ K   R  R      S+W     +RSRW   +RW     W    R +   RR
Sbjct: 30  VSLKETKRLKWSQRSQRSQWSMWSMWSRRWNRRSRWNRRSRWNRRSRWNRRSRWSMRSRR 89


>AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-PA
            protein.
          Length = 2282

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +2

Query: 437  DCTCSTYTYYDKAI 478
            DCTCST++Y+DK +
Sbjct: 2185 DCTCSTHSYHDKDV 2198


>AF254867-1|AAF77184.1| 1482|Drosophila melanogaster SNS protein.
          Length = 1482

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 18  WKKNFSNRSSSFGAYSKQTNKQIFPLYNISIDVLMFRCKMQNS 146
           W KN    +S   A  K  + +I  L N+S +   +RC+  NS
Sbjct: 519 WYKNDKRINSVIRAADKSVSAEITILANVSDNQAQYRCEASNS 561


>AE013599-717|AAF59040.2| 1479|Drosophila melanogaster CG33141-PA,
           isoform A protein.
          Length = 1479

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 18  WKKNFSNRSSSFGAYSKQTNKQIFPLYNISIDVLMFRCKMQNS 146
           W KN    +S   A  K  + +I  L N+S +   +RC+  NS
Sbjct: 517 WYKNDKRINSVIRAADKSVSAEITILANVSDNQAQYRCEASNS 559


>AE013599-716|ABI31083.1| 1542|Drosophila melanogaster CG33141-PB,
           isoform B protein.
          Length = 1542

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 18  WKKNFSNRSSSFGAYSKQTNKQIFPLYNISIDVLMFRCKMQNS 146
           W KN    +S   A  K  + +I  L N+S +   +RC+  NS
Sbjct: 517 WYKNDKRINSVIRAADKSVSAEITILANVSDNQAQYRCEASNS 559


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,740,526
Number of Sequences: 53049
Number of extensions: 484300
Number of successful extensions: 1014
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)