Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31072
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 124 1e-29
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 114 1e-26
SPAC27F1.05c |||aminotransferase class-III, unknown specificty|S... 90 3e-19
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 88 1e-18
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 86 4e-18
SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase |Schizosacch... 63 3e-11
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 30 0.29
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 30 0.38
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 29 0.50
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 29 0.66
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 29 0.88
SPBPB8B6.06c ||SPAPB8B6.06c, SPAPB8B6.06c|conserved fungal prote... 27 2.0
SPAC977.11 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.0
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.7
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 27 2.7
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 27 3.5
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 26 4.7
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 26 4.7
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 26 4.7
SPAC1B3.17 |clr2||chromatin silencing protein Clr2|Schizosacchar... 26 6.2
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 8.2
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 124 bits (299), Expect = 1e-29
Identities = 67/195 (34%), Positives = 110/195 (56%), Gaps = 5/195 (2%)
Frame = +3
Query: 6 GGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAAVVTTKEI--AANH 179
G L + DE QTG GRTG F FE HG+ PDI+T++K +G G LAAV+T++EI
Sbjct: 245 GMLLIIDEAQTGIGRTGSMF-SFEHHGIVPDILTLSKSLGAGTALAAVITSEEIEKVCYD 303
Query: 180 AKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVR 359
++ T +P+ + +G VL+V++ + L + +K+ GE L+ L+ +HP+I DVR
Sbjct: 304 NGFVFYTTHASDPLPAAIGSTVLKVVKRDNLVEKAKISGELLRSDLLRLKDKHPLIVDVR 363
Query: 360 GQGLMIGVEL---VEPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNVFRIKPPMCIT 530
G GL+ G+E+ +P + + + D + N ++ G VFRI PP+ +T
Sbjct: 364 GLGLLQGIEIASCTDPSKPSDFLGTVIGDKCLELGMNCNIVHLRG-IGGVFRIAPPLTVT 422
Query: 531 KQDVDFGISIINDAI 575
+++ I I + A+
Sbjct: 423 DEEIHKAIEIFDSAL 437
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 114 bits (275), Expect = 1e-26
Identities = 69/189 (36%), Positives = 111/189 (58%), Gaps = 1/189 (0%)
Frame = +3
Query: 12 LYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNG-FPLAAVVTTKEIAANHAKA 188
L++ADEVQTG RTG E VKPD+V + K I G +P++AV++++EI N
Sbjct: 242 LFIADEVQTGVARTGKMLC-IEHSNVKPDVVILGKAISGGVYPVSAVLSSREIMLNFEPG 300
Query: 189 AYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQG 368
+ +T+GGNP+ + V A LEV++EE L + + V+GE F L++ + P++ VRG+G
Sbjct: 301 THGSTYGGNPLGAAVSIAALEVVKEEKLTERAAVLGEKFRTALIECKS--PIVQKVRGRG 358
Query: 369 LMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDF 548
L+ V + E +KT T+ D+ ++ GVL N+ R PP+ IT++D+
Sbjct: 359 LLNAVVIDE--SKTNGRTAW--DLCLIMRSRGVLAK--PTHGNIIRFSPPLVITEEDLMK 412
Query: 549 GISIINDAI 575
GI +I ++
Sbjct: 413 GIEVIKKSL 421
>SPAC27F1.05c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 1|||Manual
Length = 484
Score = 89.8 bits (213), Expect = 3e-19
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Frame = +3
Query: 18 VADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGF-PLAAVVTTKEI---AANHAK 185
V DE+QTG GRTG FW E + PD + AKG G P A + T+E+ A N +
Sbjct: 274 VLDEIQTGCGRTGK-FWACEYENIIPDCIAFAKGFSGGLIPFAGYIATEELWNAAYNSLE 332
Query: 186 AAYFNT--FGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHP-VIGDV 356
A+ +T + N + G A ++ I + L + +G +L LQ + P V+ DV
Sbjct: 333 TAFLHTATYQENTLGLAAGVATIDYIVQNDLLSRCRKLGGIMFDRLNKLQTKFPHVMKDV 392
Query: 357 RGQGLMIGVEL------VEPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNVFRIKPP 518
RG+G+++G+E V+ T VND+ + V + +VFR PP
Sbjct: 393 RGRGMIVGIEFYPIPESVQEEFGEYYATPIVNDLADTYH---VQVYCSLNNPSVFRFLPP 449
Query: 519 MCITKQDVDFGISIINDAIKK 581
+ I + D+D G+S + A+ K
Sbjct: 450 LTIPEADLDEGLSAVESAVAK 470
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 87.8 bits (208), Expect = 1e-18
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Frame = +3
Query: 6 GGLYVADEVQTGFGRTGDHFWGFET--HGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANH 179
G + DE+Q G GR+GD W PDI+T+AK + NG P+ A + + +IAA
Sbjct: 257 GASLIYDEIQCGLGRSGD-LWAHSIVKDVASPDIITVAKPLANGLPIGATIVSSKIAAEI 315
Query: 180 AKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHP-VIGDV 356
+ +TFGGNP+A VG + + + QN + + + D ++P +I
Sbjct: 316 HPGEHGSTFGGNPVACRVGTFCVNELGSSKILQNVRKQHKALTSRFDDFVAKYPNLIRGY 375
Query: 357 RGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNVFRIKPPMCITKQ 536
G+GL++G++ EP K E + G+L+ GG NN R+ P + + +
Sbjct: 376 AGRGLLLGLQFTEPPAK----------FIELARQQGLLLLPGG--NNNTRVLPSLNVKDE 423
Query: 537 DVDFGISIINDAIK 578
+ G+ I+ +K
Sbjct: 424 VIAKGLDIMESTLK 437
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 86.2 bits (204), Expect = 4e-18
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Frame = +3
Query: 6 GGLYVADEVQTGFGRTGD-HFWGFETHGVKPDIVTMAKGIGNGF-PLAAVVTTKEIA--- 170
G ++ DEV +G GRTG H W E GV PDI ++AK +G G+ P++ + I
Sbjct: 250 GVIFYLDEVMSGIGRTGTMHAW--EQEGVTPDIQSIAKCLGGGYQPISGALVGHRIMNVF 307
Query: 171 -ANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVI 347
A A F T+ +P+A + AV ++ + L + + +G+Y +L + HP +
Sbjct: 308 EQKDAAMAGFFTYQAHPIACSAALAVQTILRRDHLVERAAEMGKYLSEKLHETFDSHPNV 367
Query: 348 GDVRGQGLMIGVELV-EPGTKTPLTTS-KVNDIHENIK-DNGVLIARG-----GRFNNVF 503
G++RG+GL G+E+V + TK KV + I ++GV + G G +
Sbjct: 368 GNIRGRGLFWGLEIVKDKATKECFPPEYKVGSLANKIGCEHGVFVYPGMGTIDGTRGDHV 427
Query: 504 RIKPPMCITKQDVDFGISIINDAIKKVV 587
+ PP IT++ +D + ++ I V
Sbjct: 428 LLAPPYIITREQIDELVEALSKTITSTV 455
>SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 474
Score = 63.3 bits (147), Expect = 3e-11
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Frame = +3
Query: 15 YVADEVQTGFGRTGDHFWGFETHGVK--PDIVTMAKGIGNGFPLAAVVTTKEIAANHAKA 188
++ DEVQTG G TG W E + PD+VT +K AA + ++A
Sbjct: 299 FIVDEVQTGVGSTGT-LWAHEQWNLPYPPDMVTFSKKFQ-----AAGIFYHDLALRPHAY 352
Query: 189 AYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHP-VIGDVRGQ 365
+FNT+ G+P + + +L+ I+++ L N K VG++ L +L ++HP I ++RG+
Sbjct: 353 QHFNTWMGDPFRAVQSRYILQEIQDKDLLNNVKSVGDFLYAGLEELARKHPGKINNLRGK 412
Query: 366 G 368
G
Sbjct: 413 G 413
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 30.3 bits (65), Expect = 0.29
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -2
Query: 523 HIGGFILNT--LLKRPPRAMSTPLSLIFSWISLTLEVVSGVLVPGSTSSTPIMRPCPLTS 350
H G F++N L P T ++ T EV++GV+ S +P+ PLT
Sbjct: 105 HYGRFVMNLRKALTSTPNVTVTEATVNELLRDETGEVITGVVTSSKKSESPVEYKAPLTI 164
Query: 349 PITGC 335
GC
Sbjct: 165 VCDGC 169
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 29.9 bits (64), Expect = 0.38
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 526 MHIGGFILNTLLKRPPRAMSTPLSLIFSWISLTLEVVSGVLVPGSTSSTPIMRP-CPLTS 350
MHI +LN LK PP ++S S I S S T V + PG + S P+ P P++
Sbjct: 195 MHIINLLLNGSLKSPPVSISP--SFIASAAS-TSSVSAPSQYPGLSRSPPVQAPNIPVSD 251
Query: 349 P 347
P
Sbjct: 252 P 252
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 29.5 bits (63), Expect = 0.50
Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = -1
Query: 581 FFDRIIDDRNAEVDV-----LFSDAHWRFYSEYIIKASTTSDEHSVVFDILMDIINFGSG 417
F DR++D+ NAEV + + W Y+ I+ + + +D L++ GS
Sbjct: 699 FTDRLVDNLNAEVSLGTVTNIDEAVSWLGYTYLYIRMRRNPLVYGIAYDELVEDPLLGSK 758
Query: 416 QRCLSSGFNKLHSDHEALSPDIANHWVLLLKIHQLPDEVFADYLTV 279
+R L S +D++ + + N +++ + ++ + +Y TV
Sbjct: 759 RRELVSVAAGRLADNQMIVYNKKNGYLIPKDLGRIASNYYINYQTV 804
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 29.1 bits (62), Expect = 0.66
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -1
Query: 485 STTSDEHSVVFD---ILMDIINFGSGQRCLSSGFNKLHSDHEALSPDIANHWVLLL 327
S S+E SV+FD +L I++ S +S F +HS HE PDIA + +L
Sbjct: 776 SPDSEEGSVLFDDGELLCGILDKSSFG---ASAFGLVHSVHELYGPDIAGRLLSVL 828
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 28.7 bits (61), Expect = 0.88
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 12/113 (10%)
Frame = -1
Query: 473 DEHSVVFDIL-MDIIN------FGSGQR--CLSSGFNKLHSDHEALSPDIANHWVLLLK- 324
DEHS+ D++ +DI + FG G C G N L S N+ ++LL
Sbjct: 347 DEHSISRDLVSVDICHIFNEMIFGKGGHLHCDPHGGNVLIRSKPKNSKSPRNYEIVLLDH 406
Query: 323 --IHQLPDEVFADYLTVLLQSFFFNNLQYSFSNGRSHRVSTESVKVGSLRVIG 171
+P E+ DY + L FN F + VS E+ + + + G
Sbjct: 407 GLYRDIPHELQVDYANMWLNIINFNEKNLKFYAKKVANVSDENFPIFATAITG 459
>SPBPB8B6.06c ||SPAPB8B6.06c, SPAPB8B6.06c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.5 bits (58), Expect = 2.0
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +1
Query: 430 LMISMRISKTTECSSLVVDALIMYSE*NLQCASLNRTSTSAFRSSMMRSKKLSTKCIIEI 609
L I I + T C+ V +MY N CA L+ ST + M K+ CII +
Sbjct: 230 LSIMYMIPQITHCTP--VSRSVMYGIQNGFCAVLSTLSTFSNELHTMPIKRAYIYCIISV 287
Query: 610 LARLKVFIFV 639
+ + V
Sbjct: 288 AISFSICVIV 297
>SPAC977.11 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 311
Score = 27.5 bits (58), Expect = 2.0
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +1
Query: 430 LMISMRISKTTECSSLVVDALIMYSE*NLQCASLNRTSTSAFRSSMMRSKKLSTKCIIEI 609
L I I + T C+ V +MY N CA L+ ST + M K+ CII +
Sbjct: 230 LSIMYMIPQITHCTP--VSRSVMYGIQNGFCAVLSTLSTFSNELHTMPIKRAYIYCIISV 287
Query: 610 LARLKVFIFV 639
+ + V
Sbjct: 288 AISFSICVIV 297
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +3
Query: 129 GFPLAAV-VTTKEIAA---NHAKAAYFNTFGGNPMASTVGKAVLEVIEEE 266
GFP+ V T+ I + N A+ A + G P+ S++GKA+LE+ EE
Sbjct: 436 GFPVGFVNAVTRHIPSPRENAARKASQSYIG--PINSSIGKAILEMSREE 483
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 3 NGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAA 146
N +++ DEV T G + + +KPD+ T+ K +G G P A
Sbjct: 236 NDIVFILDEVMTSRLSPGGLQ---QIYCLKPDLTTLGKYLGGGLPFGA 280
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 669 YSNNLKQCILXKNKNFQTGKDFYYTL 592
Y NL Q ++ K F +GK+ Y+TL
Sbjct: 352 YGVNLNQSVILKAIGFSSGKNEYHTL 377
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 485 STTSDEHSVVFDILMDIINFGSGQRCLSSGFNKLHSDHEALSPDIANHWVLLLKIHQL 312
S T+ +HS + + N G++ +SS + SD PD H L+ K +QL
Sbjct: 121 SVTAHDHSDTSPLPITSSNQKEGKKNVSSIDVSMVSDSSEFKPDSLQHEKLVKKCNQL 178
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -1
Query: 545 VDVLFSDAHWRFYSEYIIKASTTSDEHSVVFDILMDII 432
V +LF D W F++ + +ST++ E + D + ++
Sbjct: 195 VGILFEDDLWYFFNTLYMLSSTSAIEFAYFLDSIFTVV 232
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 26.2 bits (55), Expect = 4.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = -2
Query: 412 GVLVPGSTSSTPIM-----RPCPLTSPITGCCF*RSINCLMKYSPTTLLFCCSPSSSI 254
G+L+ GST ++ I+ +P L +TG R I C+ + T + + C SSI
Sbjct: 145 GLLLSGSTDASLIVWDVSSQPSRLLYKLTGHS--RGIECITRQPNTDIFWTCGSESSI 200
>SPAC1B3.17 |clr2||chromatin silencing protein
Clr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -1
Query: 611 RISIIHLVDNFFDRIIDDRNAEVDVLFSDAHWRFYSEYIIK 489
R+ ++ + N + R + D++ E F+D R+Y + +K
Sbjct: 451 RLQMVSKLSNTYFRCLHDKSVEYVCPFADVLGRWYEPWFVK 491
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.4 bits (53), Expect = 8.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 166 ISLVVTTAARGNPLPIPLAIVTISGFTPCVSKPQK*SPVRPKPVCTS 26
+S T R P + A +SGF P VS P+K + ++ K TS
Sbjct: 16 VSSAPTVNERSYPFLLD-ASAGVSGFNPVVSSPEKKARMKYKKNSTS 61
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,946,285
Number of Sequences: 5004
Number of extensions: 62224
Number of successful extensions: 229
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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