Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31072
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               26   0.31 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   3.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.8  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   5.0  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   5.0  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   8.8  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   8.8  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 136 LWQPSSPLKR*QPITRRLPTLTLSVETRWLRPLEKLYW 249
           L QP  P+K  +     L + T +++TR + P + L W
Sbjct: 436 LMQPKQPIKLFEQWKSILESGTTTLQTRTMHPYDHLVW 473


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 684 YIFPKYSNNLKQCILXKNKNFQTGKDFYY 598
           Y F KY    K+      KN  T  D+YY
Sbjct: 148 YEFSKYDKLKKKLEEWTGKNITTPWDYYY 176


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 684 YIFPKYSNNLKQCILXKNKNFQTGKDFYY 598
           Y F KY    K+      KN  T  D+YY
Sbjct: 163 YEFSKYDKLKKKLEEWTGKNITTPWDYYY 191


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 684 YIFPKYSNNLKQCILXKNKNFQTGKDFYY 598
           Y F KY    K+      KN  T  D+YY
Sbjct: 51  YEFSKYDKLKKKLEEWTGKNITTPWDYYY 79


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 246 LEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGL 371
           L + ++  +QQ      +Y ++Q + LQ  +P  G   G+GL
Sbjct: 179 LALQQQRLIQQLQITQSQYLLQQGLGLQGHNPSSGLQPGEGL 220


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 80  RLEAPKMISSTTEACLYLISY 18
           R + PK+ISS + +C Y  +Y
Sbjct: 297 RSKEPKIISSLSNSCNYSNNY 317


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -1

Query: 506 SEYIIKASTTSDEHSVVFDILMDIINFGSGQRCLSSGFNKLHSDHEAL 363
           + +I  AS T  E++V   +  D+I+   G R ++        D+E +
Sbjct: 424 ARHIPHASVTDSENTVPRYLSPDVISALKGVRFIAQHIKNADKDNEVI 471


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 366 GLMIGVELVEPGTKTPLTTSKVNDIHENIK 455
           G  + VE +E GT+         D+HE I+
Sbjct: 68  GNTLNVEKLESGTRELTPDDFTEDVHEIIE 97


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 366 GLMIGVELVEPGTKTPLTTSKVNDIHENIK 455
           G  + VE +E GT+         D+HE I+
Sbjct: 68  GNTLNVEKLESGTRELTPDDFTEDVHEIIE 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,197
Number of Sequences: 438
Number of extensions: 4079
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)