Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31067
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    27   0.21 
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   5.8  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -3

Query: 526 DINNGRGQHFIDSAHVLGEAVEDPARGVDVEEAHGGAGDGREHVVVQAGRGAHRY 362
           D+ NG  +H        G AV+ P +   V++    AGD  +  +++ G   H Y
Sbjct: 12  DLRNGGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQAGDPCDPSLLRQGVPGHHY 66


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 156 NFTQKLVHQSEAEPSSCAKTATSS 85
           N+T    HQ+ A PSS   +A++S
Sbjct: 168 NYTLGHHHQNGATPSSLVSSASAS 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,116
Number of Sequences: 438
Number of extensions: 2579
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)