Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31066
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 138 9e-34
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 124 9e-30
SPAC27F1.05c |||aminotransferase class-III, unknown specificty|S... 105 5e-24
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 100 4e-22
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 95 1e-20
SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase |Schizosacch... 75 1e-14
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 47 2e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.37
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 29 0.85
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 28 1.5
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.6
SPAC23G3.05c |||regulator of G-protein signaling |Schizosaccharo... 27 2.6
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 26 6.0
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 26 6.0
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 7.9
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 25 7.9
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 138 bits (333), Expect = 9e-34
Identities = 65/165 (39%), Positives = 103/165 (62%), Gaps = 2/165 (1%)
Frame = +2
Query: 161 GRVAAFFAESIXGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFET 340
G +A E+I GG+++ P+GYLK ++ ++ G L + DE QTG GRTG F FE
Sbjct: 210 GSLACMIVETILSTGGIIELPQGYLKALKKKCEERGMLLIIDEAQTGIGRTGSMF-SFEH 268
Query: 341 HGVKPDIVTMAKGIGNGFPLAAVVTTKEI--AANHAKAAYFNTFGGNPMASTVGKAVLEV 514
HG+ PDI+T++K +G G LAAV+T++EI ++ T +P+ + +G VL+V
Sbjct: 269 HGIVPDILTLSKSLGAGTALAAVITSEEIEKVCYDNGFVFYTTHASDPLPAAIGSTVLKV 328
Query: 515 IEEEGLQQNSKVVGEYFIMQLMDLQKQHPLIGDVRGQGLMIGVEL 649
++ + L + +K+ GE L+ L+ +HPLI DVRG GL+ G+E+
Sbjct: 329 VKRDNLVEKAKISGELLRSDLLRLKDKHPLIVDVRGLGLLQGIEI 373
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 124 bits (300), Expect = 9e-30
Identities = 68/168 (40%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Frame = +2
Query: 164 RVAAFFAESIXGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETH 343
+VAAF E I G GV+ GYL++A +L K + L++ADEVQTG RTG E
Sbjct: 206 KVAAFLVEPIQGEAGVMVPDDGYLEEAYKLCKAHNVLFIADEVQTGVARTGKMLC-IEHS 264
Query: 344 GVKPDIVTMAKGIGNG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIE 520
VKPD+V + K I G +P++AV++++EI N + +T+GGNP+ + V A LEV++
Sbjct: 265 NVKPDVVILGKAISGGVYPVSAVLSSREIMLNFEPGTHGSTYGGNPLGAAVSIAALEVVK 324
Query: 521 EEGLQQNSKVVGEYFIMQLMDLQKQHPLIGDVRGQGLMIGVELVEPGT 664
EE L + + V+GE F L++ + P++ VRG+GL+ V + E T
Sbjct: 325 EEKLTERAAVLGEKFRTALIECKS--PIVQKVRGRGLLNAVVIDESKT 370
>SPAC27F1.05c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 1|||Manual
Length = 484
Score = 105 bits (253), Expect = 5e-24
Identities = 63/178 (35%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Frame = +2
Query: 134 ELLGNSVPAGRVAAFFAESIXGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRT 313
E L ++ +G +F E I G GGV+ P GYL KA+EL K V DE+QTG GRT
Sbjct: 226 EALQVALSSGMYRSFIVEPIQGEGGVIVPPPGYLAKARELCTKYDTYLVLDEIQTGCGRT 285
Query: 314 GDHFWGFETHGVKPDIVTMAKGIGNG-FPLAAVVTTKEI---AANHAKAAYFN--TFGGN 475
G FW E + PD + AKG G P A + T+E+ A N + A+ + T+ N
Sbjct: 286 G-KFWACEYENIIPDCIAFAKGFSGGLIPFAGYIATEELWNAAYNSLETAFLHTATYQEN 344
Query: 476 PMASTVGKAVLEVIEEEGLQQNSKVVGEYFIMQLMDLQKQHP-LIGDVRGQGLMIGVE 646
+ G A ++ I + L + +G +L LQ + P ++ DVRG+G+++G+E
Sbjct: 345 TLGLAAGVATIDYIVQNDLLSRCRKLGGIMFDRLNKLQTKFPHVMKDVRGRGMIVGIE 402
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 99.5 bits (237), Expect = 4e-22
Identities = 66/195 (33%), Positives = 107/195 (54%), Gaps = 11/195 (5%)
Frame = +2
Query: 104 STDKYVHQL-NELLGNSVPAG--RVAAFFAESIXGA--GGVVQFPKGYLKKAQELIKKNG 268
+T++YV +L EL + G +VAAF AE++ GA G P GY K +++ K G
Sbjct: 192 TTEEYVARLAKELEDEILRVGPEKVAAFVAETVSGACTGCATPVP-GYFKAMRKVCDKYG 250
Query: 269 GLYVADEVQTGFGRTGD-HFWGFETHGVKPDIVTMAKGIGNGF-PLAAVVTTKEIA---- 430
++ DEV +G GRTG H W E GV PDI ++AK +G G+ P++ + I
Sbjct: 251 VIFYLDEVMSGIGRTGTMHAW--EQEGVTPDIQSIAKCLGGGYQPISGALVGHRIMNVFE 308
Query: 431 ANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIMQLMDLQKQHPLIG 610
A A F T+ +P+A + AV ++ + L + + +G+Y +L + HP +G
Sbjct: 309 QKDAAMAGFFTYQAHPIACSAALAVQTILRRDHLVERAAEMGKYLSEKLHETFDSHPNVG 368
Query: 611 DVRGQGLMIGVELVE 655
++RG+GL G+E+V+
Sbjct: 369 NIRGRGLFWGLEIVK 383
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 94.7 bits (225), Expect = 1e-20
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Frame = +2
Query: 164 RVAAFFAESIXGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFET- 340
+ AA E + G GG+ +L ++ K G + DE+Q G GR+GD W
Sbjct: 223 KTAAVIVEPVQGEGGICPAKPEFLIALRKACDKVGASLIYDEIQCGLGRSGD-LWAHSIV 281
Query: 341 -HGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVI 517
PDI+T+AK + NG P+ A + + +IAA + +TFGGNP+A VG + +
Sbjct: 282 KDVASPDIITVAKPLANGLPIGATIVSSKIAAEIHPGEHGSTFGGNPVACRVGTFCVNEL 341
Query: 518 EEEGLQQNSKVVGEYFIMQLMDLQKQHP-LIGDVRGQGLMIGVELVEPGTK 667
+ QN + + + D ++P LI G+GL++G++ EP K
Sbjct: 342 GSSKILQNVRKQHKALTSRFDDFVAKYPNLIRGYAGRGLLLGLQFTEPPAK 392
>SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 474
Score = 74.5 bits (175), Expect = 1e-14
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Frame = +2
Query: 167 VAAFFAESIXGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHG 346
V A E I GG + K Q +KK+ ++ DEVQTG G TG W E
Sbjct: 263 VVACIIEPIQSEGGDNHASPDFFHKLQATLKKHDVKFIVDEVQTGVGSTGT-LWAHEQWN 321
Query: 347 VK--PDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIE 520
+ PD+VT +K AA + ++A +FNT+ G+P + + +L+ I+
Sbjct: 322 LPYPPDMVTFSKKFQ-----AAGIFYHDLALRPHAYQHFNTWMGDPFRAVQSRYILQEIQ 376
Query: 521 EEGLQQNSKVVGEYFIMQLMDLQKQHP-LIGDVRGQG 628
++ L N K VG++ L +L ++HP I ++RG+G
Sbjct: 377 DKDLLNNVKSVGDFLYAGLEELARKHPGKINNLRGKG 413
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 47.2 bits (107), Expect = 2e-06
Identities = 29/94 (30%), Positives = 48/94 (51%)
Frame = +2
Query: 125 QLNELLGNSVPAGRVAAFFAESIXGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGF 304
Q EL+ +S +AA E++ GAGG + K +++ Q +KN +++ DEV T
Sbjct: 193 QFKELVNSSQD---IAAVIVEAMQGAGGAIPADKEFMQTIQLECEKNDIVFILDEVMTSR 249
Query: 305 GRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAA 406
G + + +KPD+ T+ K +G G P A
Sbjct: 250 LSPGGL---QQIYCLKPDLTTLGKYLGGGLPFGA 280
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.37
Identities = 29/87 (33%), Positives = 37/87 (42%)
Frame = -1
Query: 390 PLPIPLAIVTISGFTPCVSKPQK*SPVRPKPVCTSSATYKPPFFLINS*AFFRYPLGNCT 211
P+P P + T+S +P S P+ +PV P S T KPP +S N
Sbjct: 255 PIPPP-SNGTVS--SPPNSPPRPIAPVSMNPAINS--TSKPPLPPPSSRVSAAALAANKK 309
Query: 210 TPPAP*MDSAKNAATLPAGTELPNSSL 130
PP P S +N P G NSSL
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSL 336
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 28.7 bits (61), Expect = 0.85
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 62 ASSRDPARAPGECISTDKYVHQLNELLGNSVPAGRVAAFFAESIXGAGGVVQ 217
AS PA P E ++ + V Q + N P G++A E + G V+
Sbjct: 398 ASEEKPATGPAEESTSTQNVEQASTQNDNGTPIGQIADAIEEDVKGTAQSVE 449
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 690 TLEVVSGVLVPGSTSSTPIMRPCPLTSPISGC 595
T EV++GV+ S +P+ PLT GC
Sbjct: 138 TGEVITGVVTSSKKSESPVEYKAPLTIVCDGC 169
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 389 GFPLAAV-VTTKEIAA---NHAKAAYFNTFGGNPMASTVGKAVLEVIEEE 526
GFP+ V T+ I + N A+ A + G P+ S++GKA+LE+ EE
Sbjct: 436 GFPVGFVNAVTRHIPSPRENAARKASQSYIG--PINSSIGKAILEMSREE 483
>SPAC23G3.05c |||regulator of G-protein signaling
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 343
Score = 27.1 bits (57), Expect = 2.6
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -3
Query: 640 SDHEALSPDIANQWVLLLKIHQLHDE--VFADYLTVLLQSFFFNNLQYSFSN 491
S HE + P Q +L K HQ DE +F D T LL +F Y F N
Sbjct: 170 SPHEVMLPPQLVQPILDCKEHQRQDELRLFEDVETYLL-NFLLKPAYYRFLN 220
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 664 SSGFNKLHSDHEALSPDIANQWVLLL 587
+S F +HS HE PDIA + + +L
Sbjct: 803 ASAFGLVHSVHELYGPDIAGRLLSVL 828
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 179 FAESIXGAGGVVQFPKGYLKKAQELIKKNGGLYVA 283
F + A VVQF YLKK K+N GLY +
Sbjct: 396 FVGRVANATDVVQF---YLKKKYTRSKRNDGLYTS 427
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 426 ISLVVTTAARGNPLPIPLAIVTISGFTPCVSKPQK*SPVRPKPVCTS 286
+S T R P + A +SGF P VS P+K + ++ K TS
Sbjct: 16 VSSAPTVNERSYPFLLD-ASAGVSGFNPVVSSPEKKARMKYKKNSTS 61
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 83 RAPGECISTDKYVHQLNELLGN-SVPAGRVAAFFAESIXGAGGVVQFPKGYLKKAQELIK 259
R+P +ST Y + + LG S PA F+ S G++ G+ K L++
Sbjct: 547 RSPKVSVSTTLYTRLIEDALGEYSYPASLAGLSFSLS-PSTRGIILCISGFTDKLHVLLE 605
Query: 260 K 262
K
Sbjct: 606 K 606
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,961,076
Number of Sequences: 5004
Number of extensions: 62040
Number of successful extensions: 198
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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