Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31065
         (347 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   5.7  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    22   7.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    22   7.5  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    21   9.9  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 140 GNGVDSVETKQVEKXYSGDGASLSAPGSKRSALSXS 247
           G G D  + ++ EK Y G+G      GS R + S S
Sbjct: 604 GGGYDRDDYRRTEKDYRGNGKH-DKYGSSRHSDSSS 638


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -3

Query: 270 HSEKHSASEXDRAERLLPGALRDAPSPE*XFSTCLVSTE 154
           HSE    S    A+  +P  ++     +  FS  + STE
Sbjct: 431 HSESEELSMSTAADTAVPSGIKSPAFKQPAFSHSVCSTE 469


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -3

Query: 270 HSEKHSASEXDRAERLLPGALRDAPSPE*XFSTCLVSTE 154
           HSE    S    A+  +P  ++     +  FS  + STE
Sbjct: 431 HSESEELSMSTAADTAVPSGIKSPAFKQPAFSHSVCSTE 469


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 273 RHSEKHSASEXDRAERLLPG 214
           RH    SA E D  +R  PG
Sbjct: 283 RHLSTSSADEPDACDRKAPG 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 291,195
Number of Sequences: 2352
Number of extensions: 4664
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)