Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31065
(347 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U68162-2|AAB08425.1| 628|Homo sapiens thrombopoietin receptor p... 30 1.7
U68162-1|AAB08424.1| 635|Homo sapiens thrombopoietin receptor p... 30 1.7
M90103-1|AAA69972.1| 579|Homo sapiens c-myeloproliferative leuk... 30 1.7
M90102-1|AAA69971.1| 635|Homo sapiens c-myeloproliferative leuk... 30 1.7
DQ234353-1|ABB29982.1| 628|Homo sapiens myeloproliferative leuk... 30 1.7
AL139289-2|CAI23380.1| 635|Homo sapiens myeloproliferative leuk... 30 1.7
AL139289-1|CAB92756.2| 549|Homo sapiens myeloproliferative leuk... 30 1.7
AB029316-1|BAB39353.1| 838|Homo sapiens ring-IBR-ring domain co... 28 7.0
BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (P... 28 9.3
AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein. 28 9.3
AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein. 28 9.3
AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens ... 28 9.3
>U68162-2|AAB08425.1| 628|Homo sapiens thrombopoietin receptor
protein.
Length = 628
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = +2
Query: 65 NYVSPRMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKXYSGDGASLSAPGSKRSALSX 244
N P + LI C ++ + ++ + +D Q + DG ++P + SAL+
Sbjct: 171 NSTGPTVIQLIATETCCPALQRPHSASALDQSPCAQPTMPWQ-DGPKQTSPSREASALTA 229
Query: 245 SDAECFSLCLGAGPLWW 295
C L G +W
Sbjct: 230 EGGSCLISGLQPGNSYW 246
>U68162-1|AAB08424.1| 635|Homo sapiens thrombopoietin receptor
protein.
Length = 635
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = +2
Query: 65 NYVSPRMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKXYSGDGASLSAPGSKRSALSX 244
N P + LI C ++ + ++ + +D Q + DG ++P + SAL+
Sbjct: 178 NSTGPTVIQLIATETCCPALQRPHSASALDQSPCAQPTMPWQ-DGPKQTSPSREASALTA 236
Query: 245 SDAECFSLCLGAGPLWW 295
C L G +W
Sbjct: 237 EGGSCLISGLQPGNSYW 253
>M90103-1|AAA69972.1| 579|Homo sapiens c-myeloproliferative
leukemia virus type K protein.
Length = 579
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = +2
Query: 65 NYVSPRMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKXYSGDGASLSAPGSKRSALSX 244
N P + LI C ++ + ++ + +D Q + DG ++P + SAL+
Sbjct: 178 NSTGPTVIQLIATETCCPALQRPHSASALDQSPCAQPTMPWQ-DGPKQTSPSREASALTA 236
Query: 245 SDAECFSLCLGAGPLWW 295
C L G +W
Sbjct: 237 EGGSCLISGLQPGNSYW 253
>M90102-1|AAA69971.1| 635|Homo sapiens c-myeloproliferative
leukemia virus type P protein.
Length = 635
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = +2
Query: 65 NYVSPRMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKXYSGDGASLSAPGSKRSALSX 244
N P + LI C ++ + ++ + +D Q + DG ++P + SAL+
Sbjct: 178 NSTGPTVIQLIATETCCPALQRPHSASALDQSPCAQPTMPWQ-DGPKQTSPSREASALTA 236
Query: 245 SDAECFSLCLGAGPLWW 295
C L G +W
Sbjct: 237 EGGSCLISGLQPGNSYW 253
>DQ234353-1|ABB29982.1| 628|Homo sapiens myeloproliferative
leukemia virus oncogene protein.
Length = 628
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = +2
Query: 65 NYVSPRMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKXYSGDGASLSAPGSKRSALSX 244
N P + LI C ++ + ++ + +D Q + DG ++P + SAL+
Sbjct: 171 NSTGPTVIQLIATETCCPALQRPHSASALDQSPCAQPTMPWQ-DGPKQTSPSREASALTA 229
Query: 245 SDAECFSLCLGAGPLWW 295
C L G +W
Sbjct: 230 EGGSCLISGLQPGNSYW 246
>AL139289-2|CAI23380.1| 635|Homo sapiens myeloproliferative
leukemia virus oncogene protein.
Length = 635
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = +2
Query: 65 NYVSPRMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKXYSGDGASLSAPGSKRSALSX 244
N P + LI C ++ + ++ + +D Q + DG ++P + SAL+
Sbjct: 178 NSTGPTVIQLIATETCCPALQRPHSASALDQSPCAQPTMPWQ-DGPKQTSPSREASALTA 236
Query: 245 SDAECFSLCLGAGPLWW 295
C L G +W
Sbjct: 237 EGGSCLISGLQPGNSYW 253
>AL139289-1|CAB92756.2| 549|Homo sapiens myeloproliferative
leukemia virus oncogene protein.
Length = 549
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = +2
Query: 65 NYVSPRMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKXYSGDGASLSAPGSKRSALSX 244
N P + LI C ++ + ++ + +D Q + DG ++P + SAL+
Sbjct: 178 NSTGPTVIQLIATETCCPALQRPHSASALDQSPCAQPTMPWQ-DGPKQTSPSREASALTA 236
Query: 245 SDAECFSLCLGAGPLWW 295
C L G +W
Sbjct: 237 EGGSCLISGLQPGNSYW 253
>AB029316-1|BAB39353.1| 838|Homo sapiens ring-IBR-ring domain
containing protein Dorfin protein.
Length = 838
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 101 QLNCSSSISKYYNGNGVDSVETKQVEKXYSGDGASLSAPGSKRSALSXS 247
Q++ S SK+ + +G SV+ + Y+G G+S P K SA S
Sbjct: 617 QVDIESKPSKFRHNSGSSSVDDGSATRSYAG-GSSSGLPEGKSSATKWS 664
>BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (POZ)
domain containing 5 protein.
Length = 621
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 279 APRHSEKHSASEXDRAERLLPGALRD 202
A + + K A E + AER+LPG L D
Sbjct: 283 ADKGTSKAKAEEDEEAERILPGILND 308
>AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 279 APRHSEKHSASEXDRAERLLPGALRD 202
A + + K A E + AER+LPG L D
Sbjct: 283 ADKGTSKAKAEEDEEAERILPGILND 308
>AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 279 APRHSEKHSASEXDRAERLLPGALRD 202
A + + K A E + AER+LPG L D
Sbjct: 283 ADKGTSKAKAEEDEEAERILPGILND 308
>AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ32015 fis, clone NTONG1000052, weakly similar to
Rattus norvegicus mRNA for Kelch related protein 1. ).
Length = 472
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 279 APRHSEKHSASEXDRAERLLPGALRD 202
A + + K A E + AER+LPG L D
Sbjct: 283 ADKGTSKAKAEEDEEAERILPGILND 308
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,403,108
Number of Sequences: 237096
Number of extensions: 751934
Number of successful extensions: 1470
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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