Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31064
         (731 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0776 + 7533790-7533984,7534234-7534419,7534542-7534631,753...    29   2.9  

>08_01_0776 +
           7533790-7533984,7534234-7534419,7534542-7534631,
           7535284-7535368,7535759-7535925,7536250-7536438,
           7537183-7537296,7537391-7537510,7537590-7537712,
           7538217-7538315,7538735-7538791,7539272-7539318,
           7539391-7539534,7540028-7540205,7540663-7540743,
           7540926-7541009,7541416-7541616
          Length = 719

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 413 CLNIYKTMFPIFALNKYFK*LFSNF 487
           C   Y+ +FPI+AL +Y K +F N+
Sbjct: 666 CYMAYRNIFPIWALGEYQKLVFQNY 690


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,260,489
Number of Sequences: 37544
Number of extensions: 327735
Number of successful extensions: 558
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)