Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31064
         (731 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p pro...    30   3.7  
AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 prote...    30   3.7  
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA...    30   3.7  

>AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p protein.
          Length = 2409

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +2

Query: 536  GYTVIIYCQ----IEIEYGLYCLPSQFINKSQNVEVIYSRSQSYTSN 664
            G+T+   CQ      +  G YCLP Q +NK+  V   + R+Q+Y  N
Sbjct: 965  GHTLPRQCQPLDVFSVSQG-YCLPEQHVNKTDRVP--FERTQTYQDN 1008


>AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 protein
            protein.
          Length = 2382

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +2

Query: 536  GYTVIIYCQ----IEIEYGLYCLPSQFINKSQNVEVIYSRSQSYTSN 664
            G+T+   CQ      +  G YCLP Q +NK+  V   + R+Q+Y  N
Sbjct: 1350 GHTLPRQCQPLDVFSVSQG-YCLPEQHVNKTDRVP--FERTQTYQDN 1393


>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
            isoform A protein.
          Length = 2786

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +2

Query: 536  GYTVIIYCQ----IEIEYGLYCLPSQFINKSQNVEVIYSRSQSYTSN 664
            G+T+   CQ      +  G YCLP Q +NK+  V   + R+Q+Y  N
Sbjct: 1341 GHTLPRQCQPLDVFSVSQG-YCLPEQHVNKTDRVP--FERTQTYQDN 1384


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,041,248
Number of Sequences: 53049
Number of extensions: 590693
Number of successful extensions: 1263
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)