Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31051
(540 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543... 142 2e-34
03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,795... 134 3e-32
01_06_1250 + 35726115-35726255,35727435-35727479,35728570-357286... 130 7e-31
08_02_0714 + 20343864-20344385,20344928-20345098,20345933-203459... 30 1.4
10_01_0256 - 2688172-2688786,2690779-2690857,2691567-2691652,269... 29 1.8
11_06_0034 - 19448316-19449767 29 2.4
07_03_1343 - 25905475-25905678,25907025-25907167,25907273-259073... 29 3.1
03_06_0470 + 34164873-34165856,34166335-34166568,34166680-341670... 29 3.1
03_01_0587 - 4349150-4350115 29 3.1
02_05_0399 + 28658667-28658922,28659287-28659443,28659527-286597... 29 3.1
02_02_0310 - 8842286-8843314 29 3.1
08_02_0967 - 23110154-23110240,23110620-23110673,23111010-231111... 28 4.1
08_02_0711 + 20305341-20305859,20306278-20306448,20306995-203070... 28 5.5
08_02_0710 + 20275834-20276352,20276970-20277140,20277692-202777... 28 5.5
02_05_1096 + 34089572-34089880,34090405-34090470,34090723-340909... 28 5.5
04_02_0007 + 8464923-8465155,8466037-8466591,8466645-8467662,846... 27 7.2
02_05_1344 + 35823588-35824643 27 7.2
11_03_0015 + 8975199-8975277,8975574-8975607,8976744-8976957,897... 27 9.6
04_04_1654 - 35075409-35075926,35076396-35078694 27 9.6
02_04_0475 + 23229046-23229480,23230062-23231205,23232187-232323... 27 9.6
02_01_0406 - 2958933-2962076 27 9.6
>10_02_0114 +
5431578-5431724,5432753-5432797,5433572-5433691,
5433773-5433880,5434900-5435073,5435366-5435503,
5435879-5435986,5436131-5436238,5436340-5436488,
5437594-5437747,5437980-5438140,5438221-5438427,
5438575-5438758,5438846-5438929,5439023-5439222,
5439314-5439373,5439461-5439665
Length = 783
Score = 142 bits (344), Expect = 2e-34
Identities = 68/172 (39%), Positives = 107/172 (62%)
Frame = +1
Query: 25 PALYTIITFPFLFAVMFGDLGHGCIMAMFGGWMVVKEVSLAAKKSNNEIWNIFFAGRYII 204
P ++TI+TFPFLFA+MFGD GHG + + +++++E LA++K + +I ++ F GRY+I
Sbjct: 375 PGVFTIVTFPFLFAIMFGDWGHGICLLLATLYLIIREKKLASQKLD-DIMDMMFGGRYVI 433
Query: 205 LLMGCFSMYTGLVYNDIFSKSLNIFGSSWHIPYDNHTLAENGALTLDPKDAYTEVPYFIG 384
L+M FS+YTGL+YN+ FS +FG S + D + + AY+ G
Sbjct: 434 LMMSLFSIYTGLIYNEFFSVPFELFGKSAYACRDPSCGDATTEGLIKVRPAYS-----FG 488
Query: 385 IDPIWQSADNKIIFLNSYKMKLSIIFGVIHMIFGVCMSVVNYNFFKRRYSIF 540
+DP+W + +++ FLNS KMKLSI+ GV M G+ MS N FF+ +++
Sbjct: 489 VDPVWHGSRSELPFLNSLKMKLSILIGVAQMNLGIMMSYFNAKFFRNAINVW 540
>03_02_0381 +
7951360-7951509,7952125-7952169,7952625-7952744,
7952823-7952930,7953256-7953363,7953635-7953808,
7954054-7954191,7954643-7954750,7954866-7954973,
7955086-7955234,7955816-7955969,7956143-7956303,
7956391-7956597,7956703-7956886,7956974-7957057,
7957146-7957345,7957476-7957535,7957631-7957835
Length = 820
Score = 134 bits (325), Expect = 3e-32
Identities = 66/172 (38%), Positives = 103/172 (59%)
Frame = +1
Query: 25 PALYTIITFPFLFAVMFGDLGHGCIMAMFGGWMVVKEVSLAAKKSNNEIWNIFFAGRYII 204
P ++TI+TFPFLFAVMFGD GHG + + +++++E A++K +I + F GRY+I
Sbjct: 412 PGVFTIVTFPFLFAVMFGDWGHGICILVSTLYLIIREKKFASQKLG-DIMEMMFGGRYVI 470
Query: 205 LLMGCFSMYTGLVYNDIFSKSLNIFGSSWHIPYDNHTLAENGALTLDPKDAYTEVPYFIG 384
++M FS+YTGL+YN+ FS +FG S + D A T P+ G
Sbjct: 471 IMMALFSIYTGLIYNEFFSVPFELFGKSAYACRDPSC---GDAATEGLLKVRRTYPF--G 525
Query: 385 IDPIWQSADNKIIFLNSYKMKLSIIFGVIHMIFGVCMSVVNYNFFKRRYSIF 540
+DP+W + +++ FLNS KMK+SI+ GV M G+ +S N FF+ +++
Sbjct: 526 VDPVWHGSRSELPFLNSLKMKMSILLGVAQMNLGIVISYFNAKFFRNSVNVW 577
>01_06_1250 +
35726115-35726255,35727435-35727479,35728570-35728692,
35728804-35728911,35729247-35729360,35729440-35729613,
35729881-35729976,35730165-35730272,35730389-35730496,
35730595-35730743,35731255-35731408,35732487-35732647,
35733739-35733945,35733968-35734025,35734058-35734222,
35734305-35734388,35735670-35735863,35735952-35736011,
35736203-35736407
Length = 817
Score = 130 bits (314), Expect = 7e-31
Identities = 66/164 (40%), Positives = 101/164 (61%)
Frame = +1
Query: 25 PALYTIITFPFLFAVMFGDLGHGCIMAMFGGWMVVKEVSLAAKKSNNEIWNIFFAGRYII 204
PA+Y++ITFPFLFAVMFGD GHG + + ++++E L+++K + + F GRY+I
Sbjct: 398 PAVYSVITFPFLFAVMFGDWGHGICLLLGACVLILREKKLSSQKLGS-FMEMAFGGRYVI 456
Query: 205 LLMGCFSMYTGLVYNDIFSKSLNIFGSSWHIPYDNHTLAENGALTLDPKDAYTEVPYFIG 384
LLM FS+Y GL+YN+ FS +IFG S + + + A + +D PY G
Sbjct: 457 LLMALFSIYCGLIYNEFFSVPFHIFGKSAYECREKTCSDAHTAGLIKVRD-----PYPFG 511
Query: 385 IDPIWQSADNKIIFLNSYKMKLSIIFGVIHMIFGVCMSVVNYNF 516
+DP W+ + +++ FLNS KMK+SI+ GV M G+ +S + F
Sbjct: 512 VDPSWRGSRSELPFLNSLKMKMSILMGVTQMNLGIVLSYFDAKF 555
>08_02_0714 +
20343864-20344385,20344928-20345098,20345933-20345986,
20346300-20346386
Length = 277
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 501 HAHADTEYHVDYTEYDRQLHFVRVEEDN 418
H HA +E+ VD YD +LH V + N
Sbjct: 127 HWHAPSEHAVDGRRYDMELHMVHLNTQN 154
>10_01_0256 -
2688172-2688786,2690779-2690857,2691567-2691652,
2693046-2693113,2695175-2695244,2696191-2696320,
2696924-2697906
Length = 676
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 205 LLMGC--FSMYTGLVYNDIFSKSLNIFGSSWHIPYDNHTLAENGALTLDPKDAYTEVPY 375
+L+GC FS Y LVYN I K + +S + +H++ N L D DA + P+
Sbjct: 130 VLLGCCRFSCYF-LVYNPITGKRCLVKAASHKRLHLHHSIRCNATLICDDDDADADGPF 187
>11_06_0034 - 19448316-19449767
Length = 483
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 138 DFLHDHPAAEHRHDAAVTKVAEHHSEQERERY 43
D + AAE R AA + H+E+E ERY
Sbjct: 360 DIAARYEAAERRPSAAAAHLRRRHAEREHERY 391
>07_03_1343 -
25905475-25905678,25907025-25907167,25907273-25907366,
25907526-25907687,25907884-25907952,25908631-25908843,
25909054-25909113,25909294-25909382,25909745-25910063
Length = 450
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/27 (48%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Frame = -1
Query: 492 ADTEYHVDYTEYDRQL-HFVRVEEDNL 415
AD EY+V YTE++R+L +V++E+ +L
Sbjct: 96 ADYEYYVHYTEFNRRLDEWVKLEQLDL 122
>03_06_0470 +
34164873-34165856,34166335-34166568,34166680-34167006,
34168426-34168716
Length = 611
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 340 LDPKDAYTEVPYFIGIDPIWQ 402
+DP D Y+EVPY G +W+
Sbjct: 382 IDPDDVYSEVPYEKGFQFLWR 402
>03_01_0587 - 4349150-4350115
Length = 321
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 52 PFLFAVMFGDLGHGCIMAMFGGWMVVKEVSLAAK 153
PFLF FGDL G ++ G E ++A +
Sbjct: 271 PFLFGDQFGDLNGGAFASLMDGLFAAGEANVAGE 304
>02_05_0399 +
28658667-28658922,28659287-28659443,28659527-28659746,
28660549-28660602,28660671-28660750,28661269-28661351,
28661385-28661546,28661667-28662071,28662151-28662503,
28662590-28662835,28663158-28663481,28664110-28664154
Length = 794
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +1
Query: 277 FGSSWHIPYDNHTLAENGALTLDPKDAYTEVPYFIGIDPIWQSADNKIIFLNSYKMKLSI 456
FG S P+ H + + +LD D E P F P + ++ +++LN ++
Sbjct: 28 FGGSMRDPFLKHKVKKFDLSSLDWIDEIPECPVF---SPSIEEFEDPLVYLNKI-APIAA 83
Query: 457 IFGVIHMIFGVCMSV 501
+G+ ++ +C SV
Sbjct: 84 KYGICKIVSPLCASV 98
>02_02_0310 - 8842286-8843314
Length = 342
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -1
Query: 258 EDIVVHEAGVHREAAHEQDYVAAREEYIPDFVVRFLGGERDFLHDHPAAEHRHD 97
E +V+ A ++ + VAA EE D + R G R H H H HD
Sbjct: 146 EGVVLPVAEPDPDSRRQYAAVAAAEEEDEDEMARLHHGRRSHHHHHRHHHHHHD 199
>08_02_0967 -
23110154-23110240,23110620-23110673,23111010-23111177,
23111432-23111534,23111664-23111988,23112091-23112181
Length = 275
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 501 HAHADTEYHVDYTEYDRQLHFV 436
H H+ TE+ VD YD +LH V
Sbjct: 126 HWHSPTEHSVDGRRYDMELHMV 147
>08_02_0711 +
20305341-20305859,20306278-20306448,20306995-20307048,
20307389-20307475
Length = 276
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 501 HAHADTEYHVDYTEYDRQLHFVRVEEDN 418
H H +E+ +D YD +LH V + N
Sbjct: 125 HWHTPSEHTIDGRRYDMELHMVHLNAQN 152
>08_02_0710 +
20275834-20276352,20276970-20277140,20277692-20277745,
20277848-20277934
Length = 276
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 501 HAHADTEYHVDYTEYDRQLHFVRVEEDN 418
H H +E+ +D YD +LH V + N
Sbjct: 126 HWHTPSEHTIDGRRYDMELHMVHLNAQN 153
>02_05_1096 +
34089572-34089880,34090405-34090470,34090723-34090903,
34091164-34091360,34091484-34091534,34091609-34091700,
34092234-34092246,34092278-34092349,34092970-34093048,
34093092-34093174,34093568-34093711
Length = 428
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -1
Query: 132 LHDHPAAEHRHDAAVTKVA---EHHSEQERERYDRVQSRP 22
+HDH A +H HD V+ V+ E + E+ +D Q P
Sbjct: 352 VHDHHAHDHTHDPGVSSVSIVCEGEMDLEKGVHDIFQGSP 391
>04_02_0007 +
8464923-8465155,8466037-8466591,8466645-8467662,
8467768-8468485,8468651-8468937
Length = 936
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 30 FVHDHNVPVLVRCDVRRPWSRLHHGDVRRLDGREGS 137
++H+H +P LV CD+ +P + L D+ L G GS
Sbjct: 781 YIHNHVMPPLVHCDL-KPSNILLDVDITALLGDFGS 815
>02_05_1344 + 35823588-35824643
Length = 351
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 471 DYTEYDRQLHFVRVEEDNLVV 409
DY EYD++ H R+EE+NL +
Sbjct: 215 DY-EYDQEAHVARLEEENLTL 234
>11_03_0015 +
8975199-8975277,8975574-8975607,8976744-8976957,
8977144-8977182,8977266-8977358,8977448-8977546,
8978163-8978264,8978301-8978378,8978696-8978779,
8979172-8979237,8979861-8979947
Length = 324
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = +1
Query: 100 MAMFGGWMV----VKEVSLAAKKSNNEIWNIFFAGR 195
M G W++ K + +AAKK N WN+ F G+
Sbjct: 286 MPTVGLWLMDKVGAKRLDVAAKKGNAYGWNLLFGGK 321
>04_04_1654 - 35075409-35075926,35076396-35078694
Length = 938
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 220 FSMYTGLVYNDIFSKSLNIFGSSWHIPYDNHTLAENGALTLDPKDAYTEVPYFIG 384
FS T L+ + LN+ W IP D + +L+L+ + +P F+G
Sbjct: 129 FSGLTSLLVISLDQNPLNVSSGGWTIPADVAAAQQLQSLSLNGCNLTGAIPDFLG 183
>02_04_0475 +
23229046-23229480,23230062-23231205,23232187-23232334,
23232776-23234225
Length = 1058
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 311 WLSYGMCQEEPNMFRDLEKI 252
W+S G QE PN LEKI
Sbjct: 486 WISLGFIQERPNKHISLEKI 505
>02_01_0406 - 2958933-2962076
Length = 1047
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = +1
Query: 139 SLAAKKSNNEI-----WNIFFAGRYIILLMGCF 222
S++ K+ N +I + +FF G I+LL+GCF
Sbjct: 677 SVSRKEQNKKIVLAISFGVFFGGICILLLLGCF 709
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,199,418
Number of Sequences: 37544
Number of extensions: 295358
Number of successful extensions: 1093
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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