Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31051
         (540 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.65 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    24   1.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.1  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -1

Query: 123 HPAAEHRHDAAVTKVAEHHS--EQERERYDRVQSR 25
           H    H H    T V +HH   +Q++++  R Q R
Sbjct: 142 HHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQR 176


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 189 GPLHNPAHGLLLYVHRPRVQRYL 257
           G LHN  H  + Y+H P   RYL
Sbjct: 362 GDLHNFGHVAISYIHDPD-HRYL 383


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 183  EYIPDFVVRFLGGERDFLHDHPAAEHRHDAAVTKVAEHHSE 61
            E + D  V +   + DF+    A E  H AA  ++  HH +
Sbjct: 1063 ERLYDCYVCYSPNDEDFVLHSLAVELEHGAAGLRLCLHHRD 1103


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 456 DRQLHFVRVEEDNLVVSAL 400
           ++ LHFVR    NL +S L
Sbjct: 33  NQSLHFVRASLSNLDMSVL 51


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 456 DRQLHFVRVEEDNLVVSAL 400
           ++ LHFVR    NL +S L
Sbjct: 123 NQSLHFVRASLSNLDMSVL 141


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,807
Number of Sequences: 438
Number of extensions: 3216
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)