Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31046
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 41 0.005
AY307931-1|AAQ73825.1| 336|Homo sapiens intestinal mucin MUC3B ... 32 1.9
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 31 3.3
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 31 3.3
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 31 3.3
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 3.3
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 31 3.3
AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein. 31 5.8
AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein. 31 5.8
AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein. 30 7.6
AL773541-7|CAI18456.1| 626|Homo sapiens chromosome 6 open readi... 30 7.6
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 40.7 bits (91), Expect = 0.005
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +1
Query: 421 TNASSLITSVALA-PVEDSIGSFTTTAGAATIVLEPTD--TSSLITSVTLAP-VEDSITS 588
T L T VA V+ ++ S T T T + TD T SL+T++T + +ITS
Sbjct: 327 TTMEPLSTIVATTGTVKTTVTSSTATFRETTTLTSTTDISTESLMTAMTSTTRLTSAITS 386
Query: 589 FTTTAGAATIVLEPTDTSSIINQRINLFSLNLPSSIGMISKFTTSRT 729
TT T PT S++ + ++ S L S MI+ TT+ T
Sbjct: 387 KTTLTSLKTTASRPTANSTLSSLTSSILSSTLVPSTDMITSHTTNLT 433
>AY307931-1|AAQ73825.1| 336|Homo sapiens intestinal mucin MUC3B
precursor protein.
Length = 336
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 499 GAATIVLEPTDT-SSLITSVT-LAPVEDSITSFTTTAGAATIVLEPTDTSSIINQRINLF 672
G+ + PT ++L T+VT +P+ +ITS T T PT T+++ + ++
Sbjct: 235 GSIHTTMSPTPVFTTLKTAVTSTSPITSTITSTNTVTSMTTTTSRPTATNTLSSLTSSIL 294
Query: 673 SLNLPSSIGMISKFTTSRT 729
S + +I+ TT+ T
Sbjct: 295 SSTPAPNTEVITSHTTTTT 313
Score = 30.3 bits (65), Expect = 7.6
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSL------ITSVTLAPVEDSI 582
T + +TS + P+ +I S T T PT T++L I S T AP + I
Sbjct: 248 TTLKTAVTSTS--PITSTITSTNTVTSMTTTTSRPTATNTLSSLTSSILSSTPAPNTEVI 305
Query: 583 TSFTTT 600
TS TTT
Sbjct: 306 TSHTTT 311
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 31.5 bits (68), Expect = 3.3
Identities = 26/89 (29%), Positives = 45/89 (50%)
Frame = +1
Query: 424 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTA 603
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 604 GAATIVLEPTDTSSIINQRINLFSLNLPS 690
A+T+ P D++S + + S P+
Sbjct: 822 EASTLSTTPVDSNSPVTTSTEVSSSPTPA 850
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 31.5 bits (68), Expect = 3.3
Identities = 26/89 (29%), Positives = 45/89 (50%)
Frame = +1
Query: 424 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTA 603
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 604 GAATIVLEPTDTSSIINQRINLFSLNLPS 690
A+T+ P D++S + + S P+
Sbjct: 822 EASTLSTTPVDSNSPVTTSTEVSSSPTPA 850
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 31.5 bits (68), Expect = 3.3
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGS---FTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITS- 588
+ S+ TS AP +I + TT+A A+ PT TSS T+ T + S TS
Sbjct: 703 STTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSA 762
Query: 589 -FTTTAGAATIVLEPTDTSSIIN 654
T+T A T T +S I+
Sbjct: 763 PITSTISAPTTSTTSTPQTSTIS 785
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 460 PVEDSIGSFTTTAGAATIVL--EPTDTSSLITSVTLAP-VEDSITSFTTTAGAATIVLEP 630
PV + SF+ ++ AT V+ P +S T++P + +TS T++GAAT P
Sbjct: 11702 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 11761
Query: 631 TDTSS 645
T T S
Sbjct: 11762 TLTHS 11766
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 460 PVEDSIGSFTTTAGAATIVL--EPTDTSSLITSVTLAP-VEDSITSFTTTAGAATIVLEP 630
PV + SF+ ++ AT V+ P +S T++P + +TS T++GAAT P
Sbjct: 3406 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 3465
Query: 631 TDTSS 645
T T S
Sbjct: 3466 TLTHS 3470
>AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein.
Length = 335
Score = 30.7 bits (66), Expect = 5.8
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Frame = +1
Query: 460 PVEDSIGS-FTTTAGAATIVLEPTDTSSL------ITSVTLAPVEDSITSFTT-TAGAAT 615
P+ SI S +T T+ T L PT T++L ++S T P ++ITS TT T +T
Sbjct: 200 PITSSITSTYTVTSMTTTTPLGPTATNTLPSFTSSVSSSTPVPSTEAITSGTTNTTPLST 259
Query: 616 IV--LEPTDTSS 645
+V +DTSS
Sbjct: 260 LVTTFSNSDTSS 271
>AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein.
Length = 441
Score = 30.7 bits (66), Expect = 5.8
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Frame = +1
Query: 460 PVEDSIGS-FTTTAGAATIVLEPTDTSSL------ITSVTLAPVEDSITSFTT-TAGAAT 615
P+ SI S +T T+ T L PT T++L ++S T P ++ITS TT T +T
Sbjct: 234 PITSSITSTYTVTSMTTTTPLGPTATNTLPSFTSSVSSSTPVPSTEAITSGTTNTTPLST 293
Query: 616 IV--LEPTDTSS 645
+V +DTSS
Sbjct: 294 LVTTFSNSDTSS 305
>AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein.
Length = 755
Score = 30.3 bits (65), Expect = 7.6
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 439 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGAA-T 615
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+ T
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 555
Query: 616 IVLEPTDT 639
++ T T
Sbjct: 556 STIQTTST 563
>AL773541-7|CAI18456.1| 626|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 626
Score = 30.3 bits (65), Expect = 7.6
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
TN+ S TS + +S S TT++GA T T++ S TS + +S +S TT+
Sbjct: 286 TNSESSTTSSGASTATNS-DSSTTSSGAGT----ATNSESSTTSSGASTATNSESS-TTS 339
Query: 601 AGAATIV-LEPTDTSSIINQRINLFSLNLPSSIGMISKFTTS 723
+GA+T + + TSS N S + S I ++ +S
Sbjct: 340 SGASTATNSDSSTTSSGAGTATNSESSTVSSGISTVTNSESS 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,669,641
Number of Sequences: 237096
Number of extensions: 1471178
Number of successful extensions: 3323
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3297
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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