Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31046
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 34 0.093
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 34 0.093
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 34 0.12
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 32 0.49
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 31 0.65
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 31 0.65
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 31 0.65
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 31 0.65
U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical pr... 31 0.86
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 31 0.86
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical pr... 30 1.5
U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 29 2.6
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 29 2.6
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 29 2.6
AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical ... 29 2.6
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 29 3.5
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 4.6
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 4.6
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 6.1
AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical ... 28 6.1
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 28 6.1
Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical p... 28 8.0
Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical p... 28 8.0
Z49969-4|CAA90268.1| 309|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T ++ T+ P + TTT T PT T++ T+ T AP + T TTT
Sbjct: 148 TETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTT 207
Query: 601 AGAATIVLEPTDTSS 645
T PT T++
Sbjct: 208 TTPTTTTTVPTTTTT 222
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/75 (28%), Positives = 30/75 (40%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T + T+ E + TTT T PT T++ T+ T P + T TTT
Sbjct: 134 TTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTT 193
Query: 601 AGAATIVLEPTDTSS 645
T PT T++
Sbjct: 194 TAPTTTTTTPTTTTT 208
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T ++ T+ P + TTT T PT T++ T+ T P + T TTT
Sbjct: 155 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTT 214
Query: 601 AGAATIVLEPTDTSS 645
T PT T++
Sbjct: 215 TVPTTTTTTPTTTTT 229
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/76 (26%), Positives = 30/76 (39%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T ++ T P + TTT T PT T++ T+ T P + TTT
Sbjct: 141 TTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTT 200
Query: 601 AGAATIVLEPTDTSSI 648
T PT T+++
Sbjct: 201 TTPTTTTTTPTTTTTV 216
Score = 35.1 bits (77), Expect = 0.053
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T + T P ++ + TTT T T T+ T+ T E + T TTT
Sbjct: 99 TTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTT 158
Query: 601 AGAATIVLEPTDTSS 645
T PT T++
Sbjct: 159 TTPTTTTTTPTTTTT 173
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T ++ T+ P + TTT T PT T++ T+ T P + T TTT
Sbjct: 169 TTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTT 228
Query: 601 AGAATIVLEPTDTSS 645
T PT T++
Sbjct: 229 TTTTT----PTTTTT 239
Score = 31.9 bits (69), Expect = 0.49
Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 1/104 (0%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAP-VEDSITSFTT 597
T ++ T+ P + TTT T PT T++ T+ T P ++ + TT
Sbjct: 162 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTT 221
Query: 598 TAGAATIVLEPTDTSSIINQRINLFSLNLPSSIGMISKFTTSRT 729
T T T T++ S + TT++T
Sbjct: 222 TTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQT 265
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 487 TTTAGAATIVLEPTDT-SSLITSVTLAPVEDSITSFTTTAGAATIVLEPTDTSS 645
TTT T E T T ++ T T P + T TTT T PT T++
Sbjct: 127 TTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTT 180
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 481 SFTTTAGAATIV-LEPTDTSSLITSVTLAPVEDSITSFTTTAGAATIVLEPTDT 639
S TTT+ T PT T++ T+ T P + T TTT T E T T
Sbjct: 66 STTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTL-APVEDSITSFTT 597
T S+ T+ P + TTT T PT T+ T+ T + T+ TT
Sbjct: 68 TTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTT 127
Query: 598 TAGAATIVLEPTDTS 642
T T T T+
Sbjct: 128 TTTTPTTTTTETTTT 142
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/73 (27%), Positives = 27/73 (36%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T ++ T+ P + TTT T E T T + T T + T+ TTT
Sbjct: 82 TTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTT 141
Query: 601 AGAATIVLEPTDT 639
T E T T
Sbjct: 142 T-PTTTTTETTTT 153
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +1
Query: 415 ELTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFT 594
E+T + +T+ + + TTT T PT T+S TS T + TS T
Sbjct: 51 EVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTS-TTSTTTTTTPTTTTSTT 109
Query: 595 TTAGAATIVLEPTDTSS 645
TT T PT T++
Sbjct: 110 TTTTTTTTTATPTTTTT 126
Score = 33.9 bits (74), Expect = 0.12
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Frame = +1
Query: 412 LELTNASSLITS-VALAPVED---SIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDS 579
L LT +I S +A +P D + TTT T E T T+ +T+ T +
Sbjct: 11 LLLTYKLDVINSCIATSPTADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTST 70
Query: 580 ITSFTTTAGAATIVLEPTDTSSIINQRINLFSLNLPSSIGMISKFTTSRT 729
++ TTT T PT T+S + S+ + TT+ T
Sbjct: 71 TSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTAT 120
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 34.3 bits (75), Expect = 0.093
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 490 TTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGAATIVLEPTDTSS 645
TT+ A+T EP+ TS++ TS + +PV ++TS ++ ++T V PT T S
Sbjct: 433 TTSTASTSTTEPS-TSTVTTSPSTSPVTSTVTS---SSSSSTTVTTPTSTES 480
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 418 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTT 597
+ + S+ T+ V ++ S TTT +T + ++S T T +E + T+FT+
Sbjct: 271 IESTSTSTTTPTTTTVTSTVTS-TTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTS 329
Query: 598 TAGAATIVLEPTDTSS 645
TA +T T SS
Sbjct: 330 TASTSTSSTSTTQQSS 345
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 481 SFTTTAGAATIVLEPTD--TSSLITSVTLAPVEDSITSFTTTAGAATIVLEPTDTSSIIN 654
+FTTT +T EP+ T++ +TS + T+ TT+ A+T EP+ ++ +
Sbjct: 393 TFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTS 452
Query: 655 QRINLFSLNLPSSIGMISKFTT 720
+ + + SS + TT
Sbjct: 453 PSTSPVTSTVTSSSSSSTTVTT 474
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 34.3 bits (75), Expect = 0.093
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 490 TTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGAATIVLEPTDTSS 645
TT+ A+T EP+ TS++ TS + +PV ++TS ++ ++T V PT T S
Sbjct: 433 TTSTASTSTTEPS-TSTVTTSPSTSPVTSTVTS---SSSSSTTVTTPTSTES 480
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 418 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTT 597
+ + S+ T+ V ++ S TTT +T + ++S T T +E + T+FT+
Sbjct: 271 IESTSTSTTTPTTTTVTSTVTS-TTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTS 329
Query: 598 TAGAATIVLEPTDTSS 645
TA +T T SS
Sbjct: 330 TASTSTSSTSTTQQSS 345
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 481 SFTTTAGAATIVLEPTD--TSSLITSVTLAPVEDSITSFTTTAGAATIVLEPTDTSSIIN 654
+FTTT +T EP+ T++ +TS + T+ TT+ A+T EP+ ++ +
Sbjct: 393 TFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTS 452
Query: 655 QRINLFSLNLPSSIGMISKFTT 720
+ + + SS + TT
Sbjct: 453 PSTSPVTSTVTSSSSSSTTVTT 474
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 463 VEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAP--VEDSITSFTTTAGAATIVLEPTD 636
++ SI + +TI+++ T+T++ T+ T P + + TS TTT T EPT
Sbjct: 121 LDSSINATLVVPPNSTIIID-TETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTT 179
Query: 637 TSSII 651
T+S I
Sbjct: 180 TTSPI 184
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 421 TNASSLITSVALAP--VEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFT 594
T ++ T+ P + + S TTT T EPT T+S I + T + + T+ T
Sbjct: 141 TETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTS--TSTTTTET 198
Query: 595 TTAGAATIVLEPTDTSSI 648
T AT EPT ++ +
Sbjct: 199 PTTSEAT-THEPTASTEL 215
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 487 TTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGAATIVLEPTDTSS 645
TTT T PT T++ T+ T P + T TTT +T + E TS+
Sbjct: 97 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPLTEVFRTST 149
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 487 TTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGAAT 615
TTT T PT T++ T+ T P + T TTT T
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 132
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +1
Query: 439 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAP-------VEDSITSFTT 597
+ V+ P S S TT + T + T +S T+ T P S T+ TT
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTT 636
Query: 598 TAGAATIVLEPTDTSS 645
T+ AT +PT T++
Sbjct: 637 TSTTATTTPQPTTTTT 652
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +1
Query: 439 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAP-------VEDSITSFTT 597
+ V+ P S S TT + T + T +S T+ T P S T+ TT
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTT 636
Query: 598 TAGAATIVLEPTDTSS 645
T+ AT +PT T++
Sbjct: 637 TSTTATTTPQPTTTTT 652
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 31.5 bits (68), Expect = 0.65
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSI--GSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFT 594
T ASS +TS A ++ + TTT A+T + TS+ +TS T+ P +T+
Sbjct: 225 TEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTV-PTTTVVTTVP 283
Query: 595 TTAGAATIVLEPTDTSS 645
TT +T + T++
Sbjct: 284 TTTATSTSTSTASTTTT 300
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 31.5 bits (68), Expect = 0.65
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSI--GSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFT 594
T ASS +TS A ++ + TTT A+T + TS+ +TS T+ P +T+
Sbjct: 207 TEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTV-PTTTVVTTVP 265
Query: 595 TTAGAATIVLEPTDTSS 645
TT +T + T++
Sbjct: 266 TTTATSTSTSTASTTTT 282
>U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical
protein C06G1.2 protein.
Length = 182
Score = 31.1 bits (67), Expect = 0.86
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTS--SLITSVTLAPVEDSITSFT 594
T S T V P ++ TTT T E T T+ S T+ E + T+ T
Sbjct: 57 TTVDSTTTEVETTPTTEA----TTTVAETTTEAETTTTTVESTTTTTEATTTEAATTTTT 112
Query: 595 TTAGAATIVLEPTDTSSII 651
TT AT E T T +I
Sbjct: 113 TTEEPATTTKEITTTEIVI 131
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 31.1 bits (67), Expect = 0.86
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTD----TSSLITSVTLAPVEDSITS 588
T+ +S+ TS P ++ S TT T + PT TS++ TS T P S
Sbjct: 150 TSTTSITTSTLSPP--STVQSTTTAKPTTTSTITPTTSADPTSTITTSTTPNPSSPSTVQ 207
Query: 589 FTTTAGAATIVLEPT 633
TTTA + + T
Sbjct: 208 STTTAEPTSTITSTT 222
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Frame = +1
Query: 430 SSLITSVALAPVEDSIGSFTTTAGA-------------ATIVLEPTDTSSLITSVTLAPV 570
S++ TS P S TTTA T V++ T T+ +++T V
Sbjct: 190 STITTSTTPNPSSPSTVQSTTTAEPTSTITSTTVPESSTTSVVQSTTTAEPTSTITSTTV 249
Query: 571 EDSITSFTTTAGAATIVLEPTDTSSII 651
+S TS T+ A+T L PT T S I
Sbjct: 250 PESSTSLLTSTLASTTTLIPTSTMSTI 276
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Frame = +1
Query: 418 LTNASSL---ITSVALAPVEDS-----IGSFTTTAGAATIVLEPTDTSSLITSVTLAPVE 573
L NASS +TS AP +S + S TTT + T +E T T+ + S + PV+
Sbjct: 398 LLNASSARPNVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVK 457
Query: 574 DS----ITSFTTTAGAA-TIVLEPTDTSSIINQR-INLFSLNLPSSI 696
+ +T +TT T T +S + ++R + F+ N +SI
Sbjct: 458 STTIAPVTMPSTTEKTTFTSTSSSTTSSPVCSKRTVGFFTGNSTTSI 504
>Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical
protein K04D7.6 protein.
Length = 360
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 415 ELTNASSLITSVALAP--VEDSIGSFTTTAGAATIVLEPTDTSS 540
E T LI AL P E SI TTTA A IV EPT +SS
Sbjct: 258 EATPVFILIAFGALMPDLKEWSISKTTTTAEATIIVTEPTSSSS 301
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 520 EPTDTSSLITSVTLAP--VEDSITSFTTTAGAATIVLEPTDTSS 645
E T LI L P E SI+ TTTA A IV EPT +SS
Sbjct: 258 EATPVFILIAFGALMPDLKEWSISKTTTTAEATIIVTEPTSSSS 301
>U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical
protein C04G6.2 protein.
Length = 280
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 469 DSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGAATIVL-EPTDTSS 645
D + + TTT+ T T T + T++TLAP ++ + G + + PTD
Sbjct: 52 DPVSTTTTTSSTTTTTTTTTTTEATTTTLTLAPNPCTMCAPIYNTGCMGVGMPSPTDWCV 111
Query: 646 IINQRINLFSLNLPSSIGMISKFTT 720
I + +SL + G+IS TT
Sbjct: 112 IGDDIPVTYSL-VDDGAGLISCETT 135
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +1
Query: 427 ASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAG 606
A ++I + E SI T T +T PT T+S ITS T AP S S + A
Sbjct: 316 APTVIKPYPPSSTESSIDFTTATESTST----PTSTTSDITSTTTAPTSASTYSTDSWAT 371
Query: 607 AATIVLEPTDTS 642
A +++ T T+
Sbjct: 372 ARQELVDFTATT 383
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 418 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITS-VTLAPVEDSITSFT 594
L ASS T + AP G+ TTTA AA ++ T+ T+ P + T
Sbjct: 444 LFGASSTTTPASTAPTGGLFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAAT 503
Query: 595 TT--AGAATIVLEPTDTSS 645
TT A AAT+ P+ S+
Sbjct: 504 TTTPATAATLGQTPSTVSA 522
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLIT-SVTLAPVEDSI--TSF 591
T S +T+V E S TTT T EPT T+S T + T P S T+
Sbjct: 246 TTTHSSLTAVPGTTEETSTEPETTTTSTTTT--EPTTTTSTTTQTTTTVPTSTSTISTTS 303
Query: 592 TTTAGAATIVLEPTDTSS 645
TTT T + T+S
Sbjct: 304 TTTTTPTTTTTTTSTTTS 321
>AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical
protein C35A11.3 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = -3
Query: 626 SKTIVAAPAVVVNDVIESSTGASVTEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASAT 447
+ T A + V+ +++ TE+ + T A+P N + S+T +AT
Sbjct: 37 TSTTTATESTTVSTSTTATSSTPTTEIFSSNSPSTETTTCASPTTSTNGHLTSTTDGAAT 96
Query: 446 EVINDEAL 423
I E L
Sbjct: 97 SPIKTEVL 104
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3
Query: 677 KENKLIRWLIIDEVSVGSKTIVAAPAVVVNDVIESSTGASVTEVIN 540
KE +R LI+D+V V TI P+ V + +IE +T+VIN
Sbjct: 284 KEPLSVRKLILDKVLVLPNTISFPPSQVCDLLIEHDPEMPLTKVIN 329
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3
Query: 677 KENKLIRWLIIDEVSVGSKTIVAAPAVVVNDVIESSTGASVTEVIN 540
KE +R LI+D+V V TI P+ V + +IE +T+VIN
Sbjct: 284 KEPLSVRKLILDKVLVLPNTISFPPSQVCDLLIEHDPEMPLTKVIN 329
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSF-TT 597
T ++ T+ P + TTT + T T T + T+ S T+F TT
Sbjct: 274 TTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTT 333
Query: 598 TAGAATIVLEPTDTSS 645
T T PT T++
Sbjct: 334 TITTTTQTTTPTTTAT 349
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +1
Query: 412 LELTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSF 591
L + A + T+VA + + TT T T T + + TLA + ++
Sbjct: 214 LVTSTAPEVTTTVAQTTTAPIVTTANTTTQGVTTTAGVTTTVTRAQNSTLAATTTAPSTN 273
Query: 592 TTTAGAATIVLEPTDTSSIIN 654
TTT G T V + T ++ N
Sbjct: 274 TTTQGVTTTVGKTTTVTTAQN 294
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = -3
Query: 638 VSVGSKTIVAAPAVVVNDVIESSTGASVTEVINDEVSVGSKTIVAAPAVVVNDPIESSTG 459
V S T+ P VV T S + V T+V AP+ VV P T
Sbjct: 356 VVTSSPTVATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTVVTVPTTVMTS 415
Query: 458 AS 453
S
Sbjct: 416 RS 417
>AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical
protein C45H4.13 protein.
Length = 349
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 171 YGFRFNNHNFFCNYFWLNSF*VNCRRSCGYSSFSLWG 281
YG+ +NN+ + NY+ NS+ RSC S+S G
Sbjct: 311 YGYGYNNNYYSGNYYCCNSY-----RSCWRQSYSCSG 342
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +1
Query: 481 SFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGAATIVLEPTDTSSI 648
S TTT T EPT T+S I + T + + T+ T T AT EPT ++ +
Sbjct: 113 SSTTTTTTTTTTEEPTTTTSPIATTTTS--TSTTTTETPTTSEAT-THEPTASTEL 165
>Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3
Query: 659 RWLIIDEVSVGSKTIVAA 606
RW+I+D V +G+KT+ A+
Sbjct: 295 RWVIVDTVKIGTKTVPAS 312
>Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3
Query: 659 RWLIIDEVSVGSKTIVAA 606
RW+I+D V +G+KT+ A+
Sbjct: 295 RWVIVDTVKIGTKTVPAS 312
>Z49969-4|CAA90268.1| 309|Caenorhabditis elegans Hypothetical
protein W01C9.4 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 581 IESSTGASVTEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATE 444
I++ TGAS+T + G+ IV P+ V +E+ T + ATE
Sbjct: 151 IQNKTGASITSITAGYARAGAPFIV--PSAVSKAGVETMTKSLATE 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,063,572
Number of Sequences: 27780
Number of extensions: 268639
Number of successful extensions: 1015
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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