Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31046
(745 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 24 1.3
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 1.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 1.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 1.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.3
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 23 4.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 7.0
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.2
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +1
Query: 580 ITSFTTTAGAATIVLEPTDTSSIINQRINLFSLNLPSSIGMISKFTTS 723
I+ A I +++ +NQ +N ++N+P +I +TS
Sbjct: 518 ISKLVNKRNNAKIYTSSVNSNLTVNQTVNPVAINIPGDTSIIVDSSTS 565
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 734 MNVLLVVNFDIIPIDDGRFKENKLIRWLIIDEVS 633
M +LLV N I+P+ F ++ RW+ + +S
Sbjct: 95 MLLLLVANLIILPVAISFFNDDLSTRWIAFNCLS 128
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 734 MNVLLVVNFDIIPIDDGRFKENKLIRWLIIDEVS 633
M +LLV N I+P+ F ++ RW+ + +S
Sbjct: 95 MLLLLVANLIILPVAISFFNDDLSTRWIAFNCLS 128
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 734 MNVLLVVNFDIIPIDDGRFKENKLIRWLIIDEVS 633
M +LLV N I+P+ F ++ RW+ + +S
Sbjct: 95 MLLLLVANLIILPVAISFFNDDLSTRWIAFNCLS 128
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 579 NYIIYNNSRCCNNSFGTHRYLINN 650
N I+NN+ NN++ + Y NN
Sbjct: 87 NKTIHNNNNYNNNNYNNYNYNNNN 110
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 114 FLLRFDFNQSCSGFCSDSFYGFRFNNHNF 200
F L +++ + S YGF FN+ NF
Sbjct: 369 FPLEYEYVLAVSNRIQKVIYGFDFNDVNF 397
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +3
Query: 474 NWIIYNHSRCCNNSFGTHRYLIINYFGN 557
N ++YNH+R + + YL+ F +
Sbjct: 217 NLLLYNHARLMSQDNHSKEYLVSIMFSH 244
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 474 NWIIYNHSRCCNNSFGTHRYLIINY 548
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 474 NWIIYNHSRCCNNSFGTHRYLIINY 548
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 474 NWIIYNHSRCCNNSFGTHRYLIINY 548
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 474 NWIIYNHSRCCNNSFGTHRYLIINY 548
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,519
Number of Sequences: 438
Number of extensions: 3684
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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