Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31034
         (717 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1461 - 27299891-27301870                                         31   0.91 
12_02_0680 + 21903520-21904093,21904474-21905162                       29   3.7  
09_04_0617 - 18981258-18981949,18983869-18984427                       29   3.7  
01_06_1749 - 39636951-39638102                                         29   4.9  
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791...    29   4.9  
05_07_0098 + 27672298-27672561,27672617-27672705,27673111-276731...    28   8.5  
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716...    28   8.5  
01_06_0355 + 28657833-28660665,28660762-28661126                       28   8.5  

>08_02_1461 - 27299891-27301870
          Length = 659

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +1

Query: 586 HPSNRNALLLHGRNRQGGGTDPRGLTRGPTTSKRVYTEYTY 708
           H ++    LL GR R GGG   RGL   P  S+     Y Y
Sbjct: 282 HAADLRKKLLRGRRRGGGGGHRRGLFVFPLVSRMTGARYPY 322


>12_02_0680 + 21903520-21904093,21904474-21905162
          Length = 420

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/63 (23%), Positives = 30/63 (47%)
 Frame = +3

Query: 126 TILITNSSHXXXXXXXXIVTIQCDSSNIIADIQGVLKSFSKPNTRISYWRVVYGKHY*IS 305
           +IL+  SS         I+T+   +S ++  + GV       +T I YW+   G+ + ++
Sbjct: 195 SILVKTSSGEEFHGAKCIITVGAWASKLVKSVAGVDLPVQPLHTLICYWKARPGREHELT 254

Query: 306 KQS 314
            +S
Sbjct: 255 PES 257


>09_04_0617 - 18981258-18981949,18983869-18984427
          Length = 416

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/63 (23%), Positives = 30/63 (47%)
 Frame = +3

Query: 126 TILITNSSHXXXXXXXXIVTIQCDSSNIIADIQGVLKSFSKPNTRISYWRVVYGKHY*IS 305
           +I++  SS         I+T+   +S ++  + GV       +T I YWR   G+ + ++
Sbjct: 190 SIVVKTSSGEEFHGAKCIITVGAWASKLVRSVAGVDLPVQPLHTLICYWRARPGREHELT 249

Query: 306 KQS 314
            +S
Sbjct: 250 PES 252


>01_06_1749 - 39636951-39638102
          Length = 383

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 561 SSIVTTAAPPFKPKRITA 614
           SS+ + AAPPF P RIT+
Sbjct: 164 SSVASAAAPPFDPSRITS 181


>01_03_0205 +
           13777918-13778015,13778402-13778624,13779022-13779198,
           13779277-13779437,13779520-13780519,13780923-13781069,
           13781149-13781376,13781471-13781628,13781807-13782161
          Length = 848

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/40 (27%), Positives = 26/40 (65%)
 Frame = +3

Query: 15  FNKFIQHFNKQILI*HFNIEQKH*TIVLSFKIVDNKYTIL 134
           F  ++QH + ++L+  F  + +  T+VL++ ++  K+T+L
Sbjct: 697 FIDYVQHLHGKVLVHCFEGKSRSATVVLAYLMLRKKFTLL 736


>05_07_0098 +
           27672298-27672561,27672617-27672705,27673111-27673159,
           27673217-27673304,27673891-27674020,27674790-27675366
          Length = 398

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 578 RCNYT*NLRTYISRWVAHLRCGCL 507
           RC  T  LR    RW  HL+C CL
Sbjct: 301 RCTGTTVLRNKAPRWHEHLQCWCL 324


>04_03_0988 -
           21469811-21469831,21470823-21471047,21471327-21471634,
           21471864-21472234,21472327-21472430,21473086-21473325
          Length = 422

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 479 PGVKWLLEPIDIHNVNAPPTLRYKF*GFKYSYNGCPTLQTETH 607
           P +  L EPI +  VNA    +Y+  G KY  +G PTL    H
Sbjct: 86  PVLAGLSEPIIVAKVNAD---KYRKLGSKYGVDGFPTLMLFIH 125


>01_06_0355 + 28657833-28660665,28660762-28661126
          Length = 1065

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = +1

Query: 460 WTSSQPT--WC*VVTGAHRHPQRKCATHL 540
           WT++ P   W  V  G HRHP R  A  L
Sbjct: 56  WTAAAPYCGWLGVTCGGHRHPLRVTALEL 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,077,146
Number of Sequences: 37544
Number of extensions: 363345
Number of successful extensions: 747
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)