Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31034
         (717 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.2  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   3.8  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   3.8  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   3.8  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    22   6.7  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +3

Query: 192 CDSSNIIADIQGVLKSFSKPNTRISYWRVVYGKHY 296
           CD  +I +  +G L+  +     I++ +V+Y K +
Sbjct: 228 CDYPDIYSGYEGALRCLAHNGGEIAWTKVIYVKRF 262


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +3

Query: 192 CDSSNIIADIQGVLKSFSKPNTRISYWRVVYGKHY 296
           CD  +I +  +G L+  +     I++ +V+Y K +
Sbjct: 228 CDYPDIYSGYEGALRCLAHNGGEIAWTKVIYVKRF 262


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +3

Query: 192 CDSSNIIADIQGVLKSFSKPNTRISYWRVVYGKHY 296
           CD  +I +  +G L+  +     I++ +V+Y K +
Sbjct: 228 CDYPDIYSGYEGALRCLAHNGGEIAWTKVIYVKRF 262


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -3

Query: 148 EELVIKIVYLLSTILKDKTIV*CFCSILKCYIKICLLKC*MNL 20
           +E VIK +    +++ D  I   F  ++KC+ K   +K  +NL
Sbjct: 93  DENVIKKLVAECSVISDANIYIRFNKLVKCFGKYKTMKEVLNL 135


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -3

Query: 148 EELVIKIVYLLSTILKDKTIV*CFCSILKCYIKICLLKC*MNL 20
           +E VIK +    +++ D  I   F  ++KC+ K   +K  +NL
Sbjct: 93  DENVIKKLVAECSVISDANIYIRFNKLVKCFGKYKTMKEVLNL 135


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 337 NSYFVSPKYQTINCLRTPLFPINVPIYF 420
           N+Y     Y  IN +     P+ VPIY+
Sbjct: 319 NNYNNKKLYYNINYIEQIPVPVPVPIYY 346


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 219 IQGVLKSFSKPNTRISYWRVVYGKH 293
           IQG  +  S+P+  I Y + VY K+
Sbjct: 44  IQGTKEGKSRPSLDIDYKQRVYDKN 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,793
Number of Sequences: 438
Number of extensions: 4717
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)