Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31026
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical p...    31   0.84 
Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AL032647-5|CAA21693.1|  370|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical p...    28   7.8  
AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical ...    28   7.8  

>U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical
           protein ZK1127.10 protein.
          Length = 392

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -2

Query: 723 ISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVSD 562
           +S +   TL + L    ++A LPS +T  S   +   + G+T +  R++V + D
Sbjct: 320 LSALKVFTLAESLGGYESLAELPSIMTHASVPAETRIVLGITDNLIRISVGIED 373


>Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical
           protein Y53C12B.1 protein.
          Length = 793

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/45 (28%), Positives = 27/45 (60%)
 Frame = +2

Query: 98  ELGISAKSTIEERNQAILDFVTKISVNTQTKDVAQKNLFDKLNIL 232
           ELG + +     + + +L F  K + N++T  VAQ+ L++ ++I+
Sbjct: 699 ELGSAIRRLDTRQIEILLQFTVKWNTNSRTSSVAQRVLYEIVHIV 743


>AL032647-5|CAA21693.1|  370|Caenorhabditis elegans Hypothetical
           protein Y57A10B.6 protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = -2

Query: 693 DELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVSDF 559
           D +VSV T+ +L    T  S  TDL F++   S   RL +LV DF
Sbjct: 95  DGIVSVHTLKLL----TAVSFFTDLDFVKCSFSILSRLDLLVEDF 135


>Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 456 HHHHGMLQHQNLTHRLRPT 512
           HHHHG   H + +  +RPT
Sbjct: 317 HHHHGTHHHHHYSSTVRPT 335


>AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 456 HHHHGMLQHQNLTHRLRPT 512
           HHHHG   H + +  +RPT
Sbjct: 317 HHHHGTHHHHHYSSTVRPT 335


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,651,689
Number of Sequences: 27780
Number of extensions: 217831
Number of successful extensions: 623
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)