Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31024
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78019-2|CAB01451.1|  347|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AF047655-1|AAC04402.1|  558|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z82284-2|CAB05290.1|  402|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z35719-3|CAA84797.1|  347|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    28   7.4  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    28   7.4  
AF016444-6|AAB65933.1|  330|Caenorhabditis elegans Serpentine re...    28   7.4  

>Z78019-2|CAB01451.1|  347|Caenorhabditis elegans Hypothetical
           protein ZK863.5 protein.
          Length = 347

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
 Frame = +2

Query: 545 CKHC--WS-FLGFRY-INFKSFKIF*YAFHVFQLQFIFKCYFI 661
           CK+   WS FLGF   ++F S     Y+FH+  L FIF+CY +
Sbjct: 79  CKYLSEWSCFLGFSLQLHFHS-----YSFHLLILCFIFRCYVL 116


>AF047655-1|AAC04402.1|  558|Caenorhabditis elegans Hypothetical
           protein C17B7.8 protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 322 TFRLEHLHVINI-NKTSKFYLSLF*K*NCNYLH*LFSDTFQ 203
           +F +E L  IN+ NK  KF+   F K NCN    L+S TF+
Sbjct: 113 SFAVEKLENINLTNKFKKFFEKRFSKFNCNLAQNLYS-TFK 152


>Z82284-2|CAB05290.1|  402|Caenorhabditis elegans Hypothetical
           protein T27E7.3 protein.
          Length = 402

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 548 KHCWSFLGFRYINFKSFKIF*YAFHVFQLQFIFKCY 655
           K+C  F+GF+    KS +I  +A H+F  +   K Y
Sbjct: 42  KNCACFIGFKKTTGKSAQIVQFADHIFFTEVFLKEY 77


>Z35719-3|CAA84797.1|  347|Caenorhabditis elegans Hypothetical
           protein F17C8.5 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/84 (20%), Positives = 40/84 (47%)
 Frame = +3

Query: 279 VLFIFITCKCSKRNVSNKLISNIFVHLTRNNNIY*SI*AFQLSNINYFIRMN*NT*LFFC 458
           ++F+     CS   +S+  + +   +++  +++Y  I    L  I   +  N      +C
Sbjct: 202 LIFLSSLLLCSISLLSSSALFSSIENISYLSSVYFGIITMFLIGIGDIVPTNLVWFSGYC 261

Query: 459 LNVLASNILFSSIAFFCDSIISFF 530
           +  L S++L + I +FC + + +F
Sbjct: 262 MLFLISDVLSNQIFYFCQARVRYF 285


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = -1

Query: 679   SKEASPDKIAFEYKLKLEDV---ESILKYFKTFEIYIPETKKTPAMFAGPAHLKKEIIES 509
             SK+A+ +K+  E + +++     +++ K  +  E    E  K  A  AG   +++E    
Sbjct: 13313 SKKAAAEKLELEKQAQIKKAAGADAVKKQKELDEKNKLEANKKSA--AGKLKIEEESAAK 13370

Query: 508   QKKAIEENSMLDAKT 464
              K+ +EE + LDA+T
Sbjct: 13371 SKQTVEEQAKLDAQT 13385


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = -1

Query: 679   SKEASPDKIAFEYKLKLEDV---ESILKYFKTFEIYIPETKKTPAMFAGPAHLKKEIIES 509
             SK+A+ +K+  E + +++     +++ K  +  E    E  K  A  AG   +++E    
Sbjct: 13313 SKKAAAEKLELEKQAQIKKAAGADAVKKQKELDEKNKLEANKKSA--AGKLKIEEESAAK 13370

Query: 508   QKKAIEENSMLDAKT 464
              K+ +EE + LDA+T
Sbjct: 13371 SKQTVEEQAKLDAQT 13385


>AF016444-6|AAB65933.1|  330|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 7 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 35  LFPIYIFLSIFQPIGVHWF*FLFPCIFTFIFYKISTRFYLILN 163
           LF + + + IFQ   VHWF F   C    + + I    YLIL+
Sbjct: 53  LFHVNVII-IFQ---VHWFGFFLHCSNRIVLHTIDLHNYLILD 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,298,033
Number of Sequences: 27780
Number of extensions: 232205
Number of successful extensions: 545
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)