Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31019
         (807 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112083-1|AAI12084.1|  878|Homo sapiens protocadherin gamma sub...    30   8.6  
BC112081-1|AAI12082.1|  878|Homo sapiens protocadherin gamma sub...    30   8.6  
BC095409-1|AAH95409.1|  393|Homo sapiens chitinase domain contai...    30   8.6  
BC013642-1|AAH13642.1|  319|Homo sapiens CHID1 protein protein.        30   8.6  
BC000001-1|AAH00001.1|  393|Homo sapiens CHID1 protein protein.        30   8.6  
AK075413-1|BAC11603.1|  418|Homo sapiens protein ( Homo sapiens ...    30   8.6  
AK027711-1|BAB55316.1|  393|Homo sapiens protein ( Homo sapiens ...    30   8.6  
AF212229-1|AAK14915.1|  393|Homo sapiens GL008 protein.                30   8.6  
AF152526-1|AAD43786.1|  878|Homo sapiens protocadherin gamma C5 ...    30   8.6  
AF152339-1|AAD43733.1|  944|Homo sapiens protocadherin gamma C5 ...    30   8.6  

>BC112083-1|AAI12084.1|  878|Homo sapiens protocadherin gamma
           subfamily C, 5, isoform 2 precursor protein.
          Length = 878

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 509 PELKNYSTEVAFVKWSDPTEILNSSDVKLYPPQTYELT 622
           P L + +T +  ++  DP E+  SSD  ++PP+  +LT
Sbjct: 654 PSLSSTATVLLVLEDEDPEEMPKSSDFLIHPPERSDLT 691


>BC112081-1|AAI12082.1|  878|Homo sapiens protocadherin gamma
           subfamily C, 5, isoform 2 precursor protein.
          Length = 878

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 509 PELKNYSTEVAFVKWSDPTEILNSSDVKLYPPQTYELT 622
           P L + +T +  ++  DP E+  SSD  ++PP+  +LT
Sbjct: 654 PSLSSTATVLLVLEDEDPEEMPKSSDFLIHPPERSDLT 691


>BC095409-1|AAH95409.1|  393|Homo sapiens chitinase domain
           containing 1 protein.
          Length = 393

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 679 LLWSRTCLSCVRKSSRWNSAILPGDDLYPSDVTT 780
           L W R C+  +   S+W S IL G + Y  D  T
Sbjct: 275 LSWVRACVQVLDPKSKWRSKILLGLNFYGMDYAT 308


>BC013642-1|AAH13642.1|  319|Homo sapiens CHID1 protein protein.
          Length = 319

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 679 LLWSRTCLSCVRKSSRWNSAILPGDDLYPSDVTT 780
           L W R C+  +   S+W S IL G + Y  D  T
Sbjct: 201 LSWVRACVQVLDPKSKWRSKILLGLNFYGMDYAT 234


>BC000001-1|AAH00001.1|  393|Homo sapiens CHID1 protein protein.
          Length = 393

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 679 LLWSRTCLSCVRKSSRWNSAILPGDDLYPSDVTT 780
           L W R C+  +   S+W S IL G + Y  D  T
Sbjct: 275 LSWVRACVQVLDPKSKWRSKILLGLNFYGMDYAT 308


>AK075413-1|BAC11603.1|  418|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0104 fis, clone NT2RP2004795. ).
          Length = 418

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 679 LLWSRTCLSCVRKSSRWNSAILPGDDLYPSDVTT 780
           L W R C+  +   S+W S IL G + Y  D  T
Sbjct: 300 LSWVRACVQVLDPKSKWRSKILLGLNFYGMDYAT 333


>AK027711-1|BAB55316.1|  393|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14805 fis, clone NT2RP4001739. ).
          Length = 393

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 679 LLWSRTCLSCVRKSSRWNSAILPGDDLYPSDVTT 780
           L W R C+  +   S+W S IL G + Y  D  T
Sbjct: 275 LSWVRACVQVLDPKSKWRSKILLGLNFYGMDYAT 308


>AF212229-1|AAK14915.1|  393|Homo sapiens GL008 protein.
          Length = 393

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 679 LLWSRTCLSCVRKSSRWNSAILPGDDLYPSDVTT 780
           L W R C+  +   S+W S IL G + Y  D  T
Sbjct: 275 LSWVRACVQVLDPKSKWRSKILLGLNFYGMDYAT 308


>AF152526-1|AAD43786.1|  878|Homo sapiens protocadherin gamma C5
           short form protein protein.
          Length = 878

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 509 PELKNYSTEVAFVKWSDPTEILNSSDVKLYPPQTYELT 622
           P L + +T +  ++  DP E+  SSD  ++PP+  +LT
Sbjct: 654 PSLSSTATVLLVLEDEDPEEMPKSSDFLIHPPERSDLT 691


>AF152339-1|AAD43733.1|  944|Homo sapiens protocadherin gamma C5
           protein.
          Length = 944

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 509 PELKNYSTEVAFVKWSDPTEILNSSDVKLYPPQTYELT 622
           P L + +T +  ++  DP E+  SSD  ++PP+  +LT
Sbjct: 654 PSLSSTATVLLVLEDEDPEEMPKSSDFLIHPPERSDLT 691


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,479,735
Number of Sequences: 237096
Number of extensions: 2654090
Number of successful extensions: 5492
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5492
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)