Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31014
         (699 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC15D4.15 |pho2||4-nitrophenylphosphatase |Schizosaccharomyces...    57   3e-09
SPAC24B11.05 |||pyrimidine 5'-nucleotidase |Schizosaccharomyces ...    29   0.64 
SPCC645.02 |||conserved protein |Schizosaccharomyces pombe|chr 3...    26   6.0  
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar...    26   6.0  
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces...    25   7.9  
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ...    25   7.9  

>SPBC15D4.15 |pho2||4-nitrophenylphosphatase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 298

 Score = 56.8 bits (131), Expect = 3e-09
 Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
 Frame = +2

Query: 14  DFRINLPKMYRAITYLKRPEVLFINGATDRSVPMKPGLLALGTGVFADLVTAEVKREPVL 193
           D  +   K   A  YL+ P   F+    D + P   G    G+G  +  +     R+P +
Sbjct: 159 DMHVTYLKYCMAFQYLQDPNCAFLLTNQDSTFPTN-GKFLPGSGAISYPLIFSTGRQPKI 217

Query: 194 LGKPGKAFGEFAMKRAGITDPSRVLFIGDMIAQDIGLGKAVGFN-TLLVLTNTTKEEMLS 370
           LGKP     E  +      D  +  F+GD +  DI   K      +LLVLT  +KEE + 
Sbjct: 218 LGKPYDEMMEAIIANVNF-DRKKACFVGDRLNTDIQFAKNSNLGGSLLVLTGVSKEEEIL 276

Query: 371 HT---IRPDYYAESLGSI 415
                + PDYY ESL  +
Sbjct: 277 EKDAPVVPDYYVESLAKL 294


>SPAC24B11.05 |||pyrimidine 5'-nucleotidase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 226

 Score = 29.1 bits (62), Expect = 0.64
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 191 LLGKPGKAFGEFAMKRAGITDPSRVLFIGDMIAQDIG 301
           L+ KP     E  M+ AG+TD  + +F+ D     +G
Sbjct: 145 LIAKPMPEMYERVMREAGVTDKDKCIFVDDSYGNILG 181


>SPCC645.02 |||conserved protein |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 188

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 245 ITDPSRVLFIGDMIAQDIGLGKAVG 319
           ++  S++LFIGD +  DI L   +G
Sbjct: 144 VSSASQILFIGDRLLTDITLANIMG 168


>SPAC9G1.10c |||inositol polyphosphate phosphatase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1191

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 22/82 (26%), Positives = 36/82 (43%)
 Frame = -1

Query: 321 KPTAFPRPIS*AIMSPIKRTRLGSVMPARFIANSPKAFPGFPSSTGSRFTSAVTRSAKTP 142
           +P   PR +S  I S   R   GS+   R  +N     P  P +  S+     + S+++ 
Sbjct: 65  RPIPPPRQVSSTIGSSTGRKVSGSIQ--RLASNFKN--PSNPHADVSKIDRLPSDSSESH 120

Query: 141 VPKAKRPGFIGTDLSVAPFMKR 76
           V     P    + +SV+P +KR
Sbjct: 121 VATPSSPTISNSFVSVSPLLKR 142


>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1639

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 289 SDHVTDKKNSTRIGDAGSLHSEFTESFSWLPKQHGLSFHF 170
           S  +     +++    GS+HS   ES + L +QH  SF F
Sbjct: 32  SSKIVGSFTNSQNSSVGSVHSPILESPTSLNRQHRNSFSF 71


>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 673

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 295 ILSDHVTDKKNSTRIGDAGSLHSE 224
           IL D +T K++S  +GDA S H +
Sbjct: 635 ILLDGLTPKQSSEDVGDATSFHMD 658


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,730,955
Number of Sequences: 5004
Number of extensions: 54837
Number of successful extensions: 137
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)