Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31014
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical p... 61 6e-10
AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical ... 61 6e-10
AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical ... 61 9e-10
U61950-4|AAC24287.2| 303|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z92825-2|CAB07315.1| 266|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U97001-1|AAB52259.1| 257|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 28 5.6
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 7.4
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 65.3 bits (152), Expect = 4e-11
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +2
Query: 14 DFRINLPKMYRAITYLKRPEVLFINGATDRSVPMK-PGLLALGTGVFADLVTAEVKREPV 190
D + PK+ +A YL+ P V ++ D + P PG++ G+G + VTA R+P
Sbjct: 159 DAHFSYPKIMKASNYLQDPSVEYLVTNQDYTFPGPVPGVVIPGSGATSAAVTAVTGRDPK 218
Query: 191 LLGKPGKAFGEFAMKRAGITDPSRVLFIGDMIAQDIGLGKAVG 319
+ GKP K +F ++RA + DP R + GD + DI G A G
Sbjct: 219 VFGKPHKPMADFLLRRAHV-DPKRTVMFGDRLDTDIMFGNANG 260
>U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical
protein K09H11.7 protein.
Length = 322
Score = 61.3 bits (142), Expect = 6e-10
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Frame = +2
Query: 35 KMYRAITYLKRPEVLFINGATDRSVP-MKPGLLALGTGVFADLVTAEVKREPVLLGKPGK 211
KM +A YL+ VLF+ D + P P ++ G + R+P+ +GKP
Sbjct: 180 KMMKASNYLREEGVLFVATNEDETCPGPNPEVVIPDAGPIVAAIKCASGRDPLTVGKPCT 239
Query: 212 AFGEFAMKRAGITDPSRVLFIGDMIAQDIGLGKAVGFNTLLVLTNTTK-EEMLSHTIR-- 382
+ +KR +PSR + IGD D+ G+ G TLLVL+ + E+++ + +
Sbjct: 240 PAFNY-IKRKWNINPSRTMMIGDRTNTDVKFGRDHGMKTLLVLSGCHQIEDIIENQMNER 298
Query: 383 ----PDYYAESLGSIVP 421
PDY A LG++VP
Sbjct: 299 DDMVPDYVAPCLGALVP 315
>AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical
protein F44E7.2 protein.
Length = 335
Score = 61.3 bits (142), Expect = 6e-10
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Frame = +2
Query: 35 KMYRAITYLKRPEVLFINGATDRSVP-MKPGLLALGTGVFADLVTAEVKREPVLLGKPGK 211
KM +A YL+ VLF+ D + P P ++ G + R+P+ +GKP
Sbjct: 197 KMMKASNYLREEGVLFVATNEDETCPGPNPEVVIPDAGPIVAAIKCASGRDPLTVGKPCT 256
Query: 212 AFGEFAMKRAGITDPSRVLFIGDMIAQDIGLGKAVGFNTLLVLTNTTK-EEMLSHTIR-- 382
+ +KR +PSR + IGD D+ G+ G TLLVL+ + E+++ + +
Sbjct: 257 PAFNY-IKRKWNINPSRTMMIGDRTNTDVKFGRDHGMKTLLVLSGCHQIEDIIENQMNER 315
Query: 383 ----PDYYAESLGSIVP 421
PDY A LG++VP
Sbjct: 316 DDMVPDYVAPCLGALVP 332
>AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical
protein C53A3.2 protein.
Length = 349
Score = 60.9 bits (141), Expect = 9e-10
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Frame = +2
Query: 35 KMYRAITYLKRPEVLFINGATDRSVP-MKPGLLALGTGVFADLVTAEVKREPVLLGKPGK 211
KM +A YL+ VLF+ D + P P ++ G + R+P+ +GKP
Sbjct: 207 KMMKASNYLREEGVLFVATNEDETCPGPNPEVVIPDAGPIVAAIKCASGRDPLTVGKPCT 266
Query: 212 AFGEFAMKRAGITDPSRVLFIGDMIAQDIGLGKAVGFNTLLVLTNTTK-EEMLSHTIR-- 382
+ +KR +PSR + IGD D+ G+ G TLLVL+ + E+++ + +
Sbjct: 267 PAFNY-IKRKWNINPSRTMMIGDRTNTDVKFGRDHGMKTLLVLSGCHQIEDIIENQMNER 325
Query: 383 ----PDYYAESLGSIVP 421
PDY A LG++VP
Sbjct: 326 DDMVPDYVAPYLGALVP 342
>U61950-4|AAC24287.2| 303|Caenorhabditis elegans Hypothetical
protein C45E5.1 protein.
Length = 303
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = +2
Query: 5 FDSDFRINLPKMYRAITYLKRPEVLFINGATDRSVPMK-PGLLALGTGVFADLVTAEVKR 181
FDS F + PK+ +A +L P V F+ D + P PG++ TG ++ + R
Sbjct: 159 FDSHF--SYPKLMKAANFLADPLVEFLVCNEDSTFPGPVPGMILPETGPWSAAIQNVSGR 216
Query: 182 EP-VLLGKPGKAFGEFAMKR--AGITDPSRVLFIGDMIAQDIGLGKAVGFNTLLVLT 343
+P ++ GKP + F R AG + R + GD + D+ GK GF T+ + T
Sbjct: 217 KPDIVFGKPHEQLANFLKSRVQAGKFNSERTVMFGDRLDTDMMFGKNNGFTTVWMQT 273
>Z92825-2|CAB07315.1| 266|Caenorhabditis elegans Hypothetical
protein C13C4.4 protein.
Length = 266
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/98 (26%), Positives = 44/98 (44%)
Frame = +2
Query: 134 LGTGVFADLVTAEVKREPVLLGKPGKAFGEFAMKRAGITDPSRVLFIGDMIAQDIGLGKA 313
+ G FA + E + +GKP + + E M G+ P ++ +GD + D+G +A
Sbjct: 163 IDVGAFAAALKFSTNCEVLNIGKPSRFYFEQGMNALGMK-PEEIVMVGDDLMSDVGGAQA 221
Query: 314 VGFNTLLVLTNTTKEEMLSHTIRPDYYAESLGSIVPLI 427
G + V T + + + PD A+ L V LI
Sbjct: 222 CGMRGVQVRTGKWRPDFEKMPVTPDLTADCLYDAVKLI 259
>U97001-1|AAB52259.1| 257|Caenorhabditis elegans Hypothetical
protein K08B12.3 protein.
Length = 257
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 128 LALGTGVFADLVTAEVKREPVLLGKPGKAFGEFAMKRAG-ITDPSRVLFIGDMIAQDIGL 304
L LG G + + E ++GKP K F E A++ D S + IGD + D
Sbjct: 152 LCLGPGTYVAGLEYSAGVEATIVGKPNKLFFESALQSLNENVDFSSAVMIGDDVNDDALG 211
Query: 305 GKAVGFNTLLVLTNTTKE 358
+G +LV T ++
Sbjct: 212 AIKIGMRAILVKTGKFRD 229
>Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical
protein Y57G11C.51 protein.
Length = 160
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 252 SVMPARFIANSPKAFPGFPSSTGSRFTSAVTRSAKTPVPKAKR 124
S P R SP+ P PSS+ S TS+ S+ TP+ +R
Sbjct: 109 SANPKRSPRWSPQPDPSTPSSSTSSSTSSSPSSSSTPLTSTQR 151
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 180 RFTSAVTRSAKTPVPKAKRPGFIGTDLSVAPFMKRTSGL 64
RF R A P P P IG D+ AP M+ T L
Sbjct: 511 RFRGGRQRGAPPPPPPQPMPMLIGYDMPGAPMMQATEVL 549
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 180 RFTSAVTRSAKTPVPKAKRPGFIGTDLSVAPFMKRTSGL 64
RF R A P P P IG D+ AP M+ T L
Sbjct: 511 RFRGGRQRGAPPPPPPQPMPMLIGYDMPGAPMMQATEVL 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,878,922
Number of Sequences: 27780
Number of extensions: 296163
Number of successful extensions: 659
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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