Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31013
         (455 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...   122   1e-28
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...   119   1e-27
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...   119   1e-27
AF003386-8|AAB54262.2|  141|Caenorhabditis elegans Hypothetical ...    27   6.5  
U42832-2|AAA83572.1|  558|Caenorhabditis elegans Udp-glucuronosy...    27   8.6  
AF025471-1|AAB71058.1|  379|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score =  122 bits (294), Expect = 1e-28
 Identities = 63/93 (67%), Positives = 70/93 (75%)
 Frame = +2

Query: 83  KSTSSVLKMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDN 262
           KS  S  +M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD 
Sbjct: 24  KSNLSGQRMPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDG 83

Query: 263 IKSEYHGKGVLTAIKNINELIAPELTKANLEVT 361
            K+ + GKGVL A+ NINE IAP L     +VT
Sbjct: 84  DKAVHLGKGVLKAVSNINEKIAPALIAKGFDVT 116



 Score = 48.4 bits (110), Expect = 2e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +3

Query: 366 QREIDELMLKLDGTENKSKLGANAILGVSL 455
           Q++ID+ M+ LDG+ENK  LGANAILGVSL
Sbjct: 118 QKDIDDFMMALDGSENKGNLGANAILGVSL 147


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score =  119 bits (286), Expect = 1e-27
 Identities = 60/85 (70%), Positives = 66/85 (77%)
 Frame = +2

Query: 107 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 286
           M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD  K+ + GK
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60

Query: 287 GVLTAIKNINELIAPELTKANLEVT 361
           GVL A+ NINE IAP L     +VT
Sbjct: 61  GVLKAVSNINEKIAPALIAKGFDVT 85



 Score = 48.4 bits (110), Expect = 2e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +3

Query: 366 QREIDELMLKLDGTENKSKLGANAILGVSL 455
           Q++ID+ M+ LDG+ENK  LGANAILGVSL
Sbjct: 87  QKDIDDFMMALDGSENKGNLGANAILGVSL 116


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score =  119 bits (286), Expect = 1e-27
 Identities = 60/85 (70%), Positives = 66/85 (77%)
 Frame = +2

Query: 107 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 286
           M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD  K+ + GK
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60

Query: 287 GVLTAIKNINELIAPELTKANLEVT 361
           GVL A+ NINE IAP L     +VT
Sbjct: 61  GVLKAVSNINEKIAPALIAKGFDVT 85



 Score = 48.4 bits (110), Expect = 2e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +3

Query: 366 QREIDELMLKLDGTENKSKLGANAILGVSL 455
           Q++ID+ M+ LDG+ENK  LGANAILGVSL
Sbjct: 87  QKDIDDFMMALDGSENKGNLGANAILGVSL 116


>AF003386-8|AAB54262.2|  141|Caenorhabditis elegans Hypothetical
           protein F59E12.3 protein.
          Length = 141

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +2

Query: 86  STSSVLKMVIKSIKARQIFDSR--GNPT--VEVDLVTELGLFRAAVPSGASTGV 235
           S  ++ K+  KS   R +  +   G+P+  + ++LVT L +FR+ VP     GV
Sbjct: 32  SFGAIFKVTEKSTGTRLVLKAELPGSPSNDLRIELVTMLRVFRSYVPEVTDKGV 85


>U42832-2|AAA83572.1|  558|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein57 protein.
          Length = 558

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 269 SEYHGKGVLTAIKNINE 319
           SEYH K +L A+ N+N+
Sbjct: 326 SEYHAKAILKALTNLND 342


>AF025471-1|AAB71058.1|  379|Caenorhabditis elegans Hypothetical
           protein R52.3 protein.
          Length = 379

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 340 GKFRSNQFIDIFDCGQNSLAMIFTLDVISQFKSFMNTSGC 221
           GKF S Q+ D+FD   +S+     +  I   K ++    C
Sbjct: 162 GKFYSVQYTDVFDNRDSSMGSSTFISWIDMEKEYVTNDDC 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,035,340
Number of Sequences: 27780
Number of extensions: 153079
Number of successful extensions: 461
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)