Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31004
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 200 1e-51
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 91 6e-19
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 58 9e-09
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 58 9e-09
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 43 3e-04
Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 4.5
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 29 4.5
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 4.5
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 28 7.9
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 28 7.9
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 200 bits (487), Expect = 1e-51
Identities = 94/201 (46%), Positives = 133/201 (66%), Gaps = 4/201 (1%)
Frame = +1
Query: 148 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 327
Q+V+ ++ + +P YK +L+T+G Q+L+D++GK+YLD FGGIVTVSVGHCHPK+
Sbjct: 2 QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60
Query: 328 NAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKA 507
NAAL +Q LWHTT++Y IYEY E+L +K P LN V+ VNSGSEAN+LA LA+
Sbjct: 61 NAALTEQAQKLWHTTSIYHTEPIYEYAEKLLSKFPSKLNSVFFVNSGSEANDLALALARN 120
Query: 508 YTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYHAVHPDPFRXAFGG--CRD 681
YTG D+IS++ YHG T +++G T +++ P + +++ DP+R FGG CRD
Sbjct: 121 YTGRFDVISMRNGYHGMTQTVLGATNLGNWKPVFPHGFNIFKSLNADPYRGIFGGSNCRD 180
Query: 682 SISQAPG-SCSC-TGECISTD 738
S Q C C G C ++D
Sbjct: 181 SPIQVKNRKCDCKPGSCQASD 201
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 91.5 bits (217), Expect = 6e-19
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Frame = +1
Query: 211 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRH 387
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL T N+ +
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVS 105
Query: 388 PKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSS 567
++ + EQ+ + LPG L+ V NSGSEAN+LA LA+ YT + D I ++ +YHG+ ++
Sbjct: 106 TQLTDCAEQILSTLPG-LDTVLFCNSGSEANDLALRLARDYTKHKDAIVIEHAYHGHVTT 164
Query: 568 LMGLTATQ-SYRMAIPVPPGFYHAVHPDPFR 657
M L+ + + + P + A PD FR
Sbjct: 165 TMELSPYKFDHGSTVSQPDWVHVAPCPDVFR 195
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 77.0 bits (181), Expect = 1e-14
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +1
Query: 211 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRH 387
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL T N+ +
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVS 105
Query: 388 PKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYH 552
++ + EQ+ + LPG L+ V NSGSEAN+LA LA+ YT + D I ++ H
Sbjct: 106 TQLTDCAEQILSTLPG-LDTVLFCNSGSEANDLALRLARDYTKHKDAIVIEQLVH 159
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 57.6 bits (133), Expect = 9e-09
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = +1
Query: 211 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 390
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 391 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 510
+ EY E+ KL + V +N+G EA E A LA+ +
Sbjct: 100 VLGEY-EEYVTKL-FKYDKVLPMNTGVEACESAVKLARRW 137
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 57.6 bits (133), Expect = 9e-09
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = +1
Query: 211 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 390
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 391 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 510
+ EY E+ KL + V +N+G EA E A LA+ +
Sbjct: 100 VLGEY-EEYVTKL-FKYDKVLPMNTGVEACESAVKLARRW 137
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1
Query: 211 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 375
PV L++G +++D +GK+Y D V+ GHCHPK+ LKD V+ N
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91
>Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical
protein T26F2.3 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Frame = +1
Query: 232 HMQWLYDNDGKRYLDLF-GGIVTVSVGH-----C---HPKVNAALKDQLDVLWHTTNLYR 384
H +WL+ N K Y F G + T+ +G C K+ + ++DV W N
Sbjct: 205 HGKWLHWNSQKHYFQSFLGNVPTILIGRKDQNDCVYQVDKIKTSEIPKMDVKWKVQNCL- 263
Query: 385 HPKIYEYVEQLAAKLPGD 438
+++ + ++ +KLP D
Sbjct: 264 -AQLFTVLNKIMSKLPDD 280
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +1
Query: 472 EANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYH 633
EAN ATL + A T N I + +Y Y SL YR +PV F H
Sbjct: 508 EANRNATLYSYALTENFLIFTTSNNYIVY-FSLSEWAIVSEYRHVVPVRSIFPH 560
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +1
Query: 472 EANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYH 633
EAN ATL + A T N I + +Y Y SL YR +PV F H
Sbjct: 508 EANRNATLYSYALTENFLIFTTSNNYIVY-FSLSEWAIVSEYRHVVPVRSIFPH 560
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 97 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 213
K+ P + P+ G YQQ++Q PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +1
Query: 472 EANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYH 633
EAN ATL + A T N I + +Y Y SL YR +PV F H
Sbjct: 508 EANRNATLYSYALTENFLIFTTSNNYIVY-FSLSEWAIVSEYRHVVPVRSIFPH 560
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 412 QLAAKLPGDLNVV--YLVNSGSEAN-ELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLT 582
Q A +L +N + +L+N+ ++ N + L A+ + +I S + GY + L LT
Sbjct: 102 QQAVQLDQQINELNTFLINAQADTNPNNSPLFAQLTAFSNNITSQNATLQGYITKLNALT 161
Query: 583 ATQS 594
ATQ+
Sbjct: 162 ATQA 165
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 412 QLAAKLPGDLNVV--YLVNSGSEAN-ELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLT 582
Q A +L +N + +L+N+ ++ N + L A+ + +I S + GY + L LT
Sbjct: 105 QQAVQLDQQINELNTFLINAQADTNPNNSPLFAQLTAFSNNITSQNATLQGYITKLNALT 164
Query: 583 ATQS 594
ATQ+
Sbjct: 165 ATQA 168
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 171 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 43
SFH L R+R R R R + RSDDV A S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,255,107
Number of Sequences: 27780
Number of extensions: 420959
Number of successful extensions: 1240
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -