Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31002
         (451 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L29349-1|AAA60962.1|  378|Homo sapiens granulocyte-macrophage co...    29   7.3  
BX649553-7|CAI95729.1|  377|Homo sapiens colony stimulating fact...    29   7.3  
AL831918-1|CAD38579.1|  810|Homo sapiens hypothetical protein pr...    29   9.7  
AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific prot...    29   9.7  
AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.     29   9.7  

>L29349-1|AAA60962.1|  378|Homo sapiens granulocyte-macrophage
           colony-stimulating factor receptor alpha-subunit 3
           protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -2

Query: 297 HPSNRNALLLHGRNRQGGGTYPRGLTRGPTTSNSALRPFQFHQD 166
           HP  R  L   G +R+G    PRG   G   S SA R   F  D
Sbjct: 323 HPRGRERLPRRGLDREGNYLRPRGCRNGMDISASATRGNCFLDD 366


>BX649553-7|CAI95729.1|  377|Homo sapiens colony stimulating factor
           2 receptor, alpha, low-affinity (granulocyte-macropha
           protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -2

Query: 297 HPSNRNALLLHGRNRQGGGTYPRGLTRGPTTSNSALRPFQFHQD 166
           HP  R  L   G +R+G    PRG   G   S SA R   F  D
Sbjct: 322 HPRGRERLPRRGLDREGNYLRPRGCRNGMDISASATRGNCFLDD 365


>AL831918-1|CAD38579.1|  810|Homo sapiens hypothetical protein
           protein.
          Length = 810

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 134 WDLLTAARAPPKET*QLKSSCFANESTTESESRPAEK 24
           W L   A   P ++ QL S CF  E TT++     +K
Sbjct: 461 WYLFNDAEVKPFDSAQLASECFGGEMTTKTYDSVTDK 497


>AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific
            proteinase 34 protein.
          Length = 3395

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 134  WDLLTAARAPPKET*QLKSSCFANESTTESESRPAEK 24
            W L   A   P ++ QL S CF  E TT++     +K
Sbjct: 2032 WYLFNDAEVKPFDSAQLASECFGGEMTTKTYDSVTDK 2068


>AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.
          Length = 3412

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 134  WDLLTAARAPPKET*QLKSSCFANESTTESESRPAEK 24
            W L   A   P ++ QL S CF  E TT++     +K
Sbjct: 2049 WYLFNDAEVKPFDSAQLASECFGGEMTTKTYDSVTDK 2085


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,872,296
Number of Sequences: 237096
Number of extensions: 1526552
Number of successful extensions: 2610
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2610
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)