Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31002
         (451 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ...    28   2.7  
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ...    28   2.7  
Z83234-7|CAB76745.1|  667|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z82067-4|CAB76738.1|  667|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z70311-4|CAA94373.1|  541|Caenorhabditis elegans Hypothetical pr...    27   6.3  
AL034365-3|CAA22261.1|  563|Caenorhabditis elegans Hypothetical ...    27   6.3  

>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
            protein C44E4.1a protein.
          Length = 2712

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 166  VLVKLERPQSRVTGGRTSCESARVGTTALP 255
            +L+K+E  ++++TG R +CES  +    LP
Sbjct: 1389 LLIKMETTKTKLTGYRAACESLYLRNRPLP 1418


>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
            protein C44E4.1c protein.
          Length = 2710

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 166  VLVKLERPQSRVTGGRTSCESARVGTTALP 255
            +L+K+E  ++++TG R +CES  +    LP
Sbjct: 1389 LLIKMETTKTKLTGYRAACESLYLRNRPLP 1418


>Z83234-7|CAB76745.1|  667|Caenorhabditis elegans Hypothetical
           protein W03H9.4 protein.
          Length = 667

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 431 LDGWTSSQPTWCYVVTEAHGHLQRKCATHR 342
           +DGW  ++  W  V   A   +Q+K A +R
Sbjct: 254 VDGWAKNETWWMDVTRIAEDEIQKKAAQNR 283


>Z82067-4|CAB76738.1|  667|Caenorhabditis elegans Hypothetical
           protein W03H9.4 protein.
          Length = 667

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 431 LDGWTSSQPTWCYVVTEAHGHLQRKCATHR 342
           +DGW  ++  W  V   A   +Q+K A +R
Sbjct: 254 VDGWAKNETWWMDVTRIAEDEIQKKAAQNR 283


>Z70311-4|CAA94373.1|  541|Caenorhabditis elegans Hypothetical
           protein T25B9.5 protein.
          Length = 541

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = -2

Query: 336 ISSKISV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRGPTTSNSALRPFQFHQDRGA 157
           ++ K SV  Q++P  S R+      +  +   T P G++  P+T NSA  P     + G+
Sbjct: 470 LNRKKSVDRQKIPSSSKRSFFSSLRKKNKDQVTLPAGMSISPST-NSAKPPSSETPNTGS 528

Query: 156 SKGSA 142
           S  +A
Sbjct: 529 SSPNA 533


>AL034365-3|CAA22261.1|  563|Caenorhabditis elegans Hypothetical
           protein Y69E1A.3 protein.
          Length = 563

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = -2

Query: 336 ISSKISV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRGPTTSNSALRPFQFHQDRGA 157
           ++ K SV  Q++P  S R+      +  +   T P G++  P+T NSA  P     + G+
Sbjct: 492 LNRKKSVDRQKIPSSSKRSFFSSLRKKNKDQVTLPAGMSISPST-NSAKPPSSETPNTGS 550

Query: 156 SKGSA 142
           S  +A
Sbjct: 551 SSPNA 555


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,977,546
Number of Sequences: 27780
Number of extensions: 201311
Number of successful extensions: 453
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)