Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30996
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058416-1|AAL13645.1|  754|Drosophila melanogaster GH19286p pro...    29   7.2  
AE014296-870|AAN11608.1|  754|Drosophila melanogaster CG11353-PB...    29   7.2  
AE014296-869|AAF47917.1|  754|Drosophila melanogaster CG11353-PA...    29   7.2  

>AY058416-1|AAL13645.1|  754|Drosophila melanogaster GH19286p
           protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
 Frame = +3

Query: 555 CEVLYITLS--LTTLVIKYIKFSNSAYFNQLTTAQFISYPVPILAPFSRIFELLFST--- 719
           CE+ +  L+  L  L +KY K   S   +        SY + +   F   F+  F+T   
Sbjct: 513 CEMQFFILANALLFLYVKYPKVVKSLVVSSFVATIAWSYGIGLSIKFQLSFDAAFATGTE 572

Query: 720 -ESGTLLKLLPYETGLLTSTLI 782
             +   +++LPY  G +T+ L+
Sbjct: 573 IYTSPFVRVLPYILGAVTAWLL 594


>AE014296-870|AAN11608.1|  754|Drosophila melanogaster CG11353-PB,
           isoform B protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
 Frame = +3

Query: 555 CEVLYITLS--LTTLVIKYIKFSNSAYFNQLTTAQFISYPVPILAPFSRIFELLFST--- 719
           CE+ +  L+  L  L +KY K   S   +        SY + +   F   F+  F+T   
Sbjct: 513 CEMQFFILANALLFLYVKYPKVVKSLVVSSFVATIAWSYGIGLSIKFQLSFDAAFATGTE 572

Query: 720 -ESGTLLKLLPYETGLLTSTLI 782
             +   +++LPY  G +T+ L+
Sbjct: 573 IYTSPFVRVLPYILGAVTAWLL 594


>AE014296-869|AAF47917.1|  754|Drosophila melanogaster CG11353-PA,
           isoform A protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
 Frame = +3

Query: 555 CEVLYITLS--LTTLVIKYIKFSNSAYFNQLTTAQFISYPVPILAPFSRIFELLFST--- 719
           CE+ +  L+  L  L +KY K   S   +        SY + +   F   F+  F+T   
Sbjct: 513 CEMQFFILANALLFLYVKYPKVVKSLVVSSFVATIAWSYGIGLSIKFQLSFDAAFATGTE 572

Query: 720 -ESGTLLKLLPYETGLLTSTLI 782
             +   +++LPY  G +T+ L+
Sbjct: 573 IYTSPFVRVLPYILGAVTAWLL 594


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,270,463
Number of Sequences: 53049
Number of extensions: 709066
Number of successful extensions: 1465
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)